Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1115 ATGGCAACTGCTAAGAGAGTGTTATACGTGTTTCTGGCGGCATTTCTGTGGGTAAATGCTCAACATGCATTTGTAAGCTGTGCTTTGACATCAGAGTTGCATAGCAAAATCGCTAAAGTAAAGCAAAAGGGACCTTATCTTGGTTTAATCATACCAAATGCTTTTGAACTTGACCCTCTTCTTAAGAATCCAGGCTACACTGCTACTGGCACCATCATAGACATCGATGGAAGAAGATTTCGTTTTGGATCCATTGGCGACAAGCCAGTTATACTGGTTATGACAGGACTGAGCGTGATAAATGCAGCTATCACTACTCAGCTTTTGTTGAGTTTTTTCAACGTAGATGGAGTGGTGCATTACGGCATTGCTGGAAATGCTAACCCCTCTTTGCATATTGGAGATGTAGCCATTCCCGAATCTTGGGCTCATTTAGCTCTTTGGAGTTGGCAGAGGCATGGGCAAGGGCCTCACGATGTATTACCTTTAGAAGATAATGGAGACTACACGAGGGAATTAGGGTTCTTAAATTTCGCAGAATTCACCTCAAACGTGAGTTCAGACAGTCCAGTAGACAATCAACTCAACAACATCTGGTACCAACCAGAGGAGATTTTCCCCATTGATGGCACTCCCGAAGAAAGACAACATGCCTTTTGGGTTCCTGTTGATTCCAAGTACTACTCTATTGCAAGCAAATTGAAGGATTTGGTGCTAGAAGGGTGCATAAACTCGACGACATGCTTGGCAACGAAACCAGAAGTGGCGCTTGTGAACAGAGGAATAAGCCAAGGCATCTACTTAGACAATGCAGCATATAGGAGTTTCATACACAAGAAATTCGATGTGAGCCCAGTGGACATGGAGAGTGCATCGGTGGCACTTATATGCTTACAACAGAGGATACCATTCATCGCTATTAGGGCTCTCTCAGACTTAGCCGGTGGTGGCTCTGCTGAGTCCAACGAGGCTGATACCTTCCTCTCACTCGCTGCCACTAACTCTGTCACTGTAGTCATTGAATTCGTCAAACTCTTATCACTCCACTCCAAGTGGTGGTCTCTGTAA 1068 0.4466 MATAKRVLYVFLAAFLWVNAQHAFVSCALTSELHSKIAKVKQKGPYLGLIIPNAFELDPLLKNPGYTATGTIIDIDGRRFRFGSIGDKPVILVMTGLSVINAAITTQLLLSFFNVDGVVHYGIAGNANPSLHIGDVAIPESWAHLALWSWQRHGQGPHDVLPLEDNGDYTRELGFLNFAEFTSNVSSDSPVDNQLNNIWYQPEEIFPIDGTPEERQHAFWVPVDSKYYSIASKLKDLVLEGCINSTTCLATKPEVALVNRGISQGIYLDNAAYRSFIHKKFDVSPVDMESASVALICLQQRIPFIAIRALSDLAGGGSAESNEADTFLSLAATNSVTVVIEFVKLLSLHSKWWSL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1115 355 Pfam Phosphorylase superfamily 47 343 IPR000845 GO:0003824|GO:0009116
Apr5g1115 355 PANTHER BARK STORAGE-LIKE PROTEIN 1 349 - -
Apr5g1115 355 SUPERFAMILY Purine and uridine phosphorylases 44 346 IPR035994 GO:0003824|GO:0009116
Apr5g1115 355 PANTHER PURINE NUCLEOSIDE PHOSPHORYLASE 1 349 - -
Apr5g1115 355 CDD MTAN 47 342 - -
Apr5g1115 355 Gene3D Nucleoside phosphorylase domain 46 345 IPR035994 GO:0003824|GO:0009116
Apr5g1115 355 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1115 Apr-Chr5 15750460 15752786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1115 - - gsj:114415138 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1115 5 15750460 15752786 Apr5g1115 5 15750460 15752786 ECH