Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1112 ATGAGCTCCAATGCCCCTTTCTCTAAGTGCTCAGCTCACCAGCTGGAGAACATAGATGAGAATGCTCCTGCAGATTGGCCTGCATCATCTTGTGCTCCACCTGATACTCCAACTGAATCTATGGAGTTCCTTGCTAGATCATGGAGTCTTTCCGCTATGGAACTCTCCAAAGCATTGCACAGCACTAATATCACAACTGGCAATGGTATTGAGATGCCACTTACATGCCCTTCTGGCAACCAACTTGATACCAAGAGTTCCACTGCTTCAAAGGATTCTTTATCTAACGGGTGTTGCCGTCCAATTTTGCCAAAAGACAGTAACGAAAAAAAGCTTTACAGGAGCTTGATAAGAGGGAGGACAATGGGTAGGTGGTTGAAAGATCAAAAGGAGAGAAAAAAACAAGAAATTAGGACCCATAATGCTCAGTTGCATGCTGCAGTATCTGTGGCTGGTGTTGCTGCCGCTATTGCAGCAGTTGCAGCTTCAACAGCATCACCTGAAATGCCTAATGCCAACCAAAAGAACCCTCCCATGACTTCCGCTGCTATTGCATCTGCAGCAGCTCTAGTAGCCTCTCACTGCATTGAGATTGCTGAAGATATGGGAGCTGAACACGACCAAATCTTAGCAGTGGTCAACTCTGCCATTAATGCAAAAACCAATGGAGATATAATGACTCTTACAGCTGGAGCAGCCACTGCCTTGCGAGGAGCTGCTACTCTAAAGGCAAGGCTGCAAAAGGGGCTTGGAGCCGCTACAATACCTCTAGTTGAGGACAACTGTGATGAAGGCAAGGAGGCAAACATCTTGACCGCACTGGACTATGTTTTTAGAGGTGGAGAACTTCTCAAACGTACAAGAAAAGGAGCTCTTCACTGGAAGCAAGTGTCCTTCAATATAAACTCAAATTTGCAGGTTGTAGTCAAAATGAAAAGCAAGCATATGGCAGGAACATTCACAAAAAAGAAGAAATATATAGTCACTGGAGTTTGCAGTGATATCCTAGCTTGGCCCGGGAGGGACAAGGAAAACATCAATGACAAGAGGGCATATTTTGGAATTAAAACAATAGACAGAATAATAGAATTTGAATGTGCAAGTAAAGGAGACAAACAGCTTTGGCTTGAGGGGATCCAGTATATGTTGAATTGCCGTGTCAAAGTAACATAA 1173 0.4416 MSSNAPFSKCSAHQLENIDENAPADWPASSCAPPDTPTESMEFLARSWSLSAMELSKALHSTNITTGNGIEMPLTCPSGNQLDTKSSTASKDSLSNGCCRPILPKDSNEKKLYRSLIRGRTMGRWLKDQKERKKQEIRTHNAQLHAAVSVAGVAAAIAAVAASTASPEMPNANQKNPPMTSAAIASAAALVASHCIEIAEDMGAEHDQILAVVNSAINAKTNGDIMTLTAGAATALRGAATLKARLQKGLGAATIPLVEDNCDEGKEANILTALDYVFRGGELLKRTRKGALHWKQVSFNINSNLQVVVKMKSKHMAGTFTKKKKYIVTGVCSDILAWPGRDKENINDKRAYFGIKTIDRIIEFECASKGDKQLWLEGIQYMLNCRVKVT* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1112 390 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 11 388 - -
Apr5g1112 390 Pfam Plant pleckstrin homology-like region 282 385 IPR013666 -
Apr5g1112 390 Gene3D - 258 388 IPR011993 -
Apr5g1112 390 Pfam Auxin canalisation 34 254 IPR008546 -
Apr5g1112 390 PANTHER EXPRESSED PROTEIN 11 388 IPR040269 -
Apr5g1112 390 SUPERFAMILY PH domain-like 264 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1112 Apr-Chr5 15722527 15727060 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1112 - - gmx:100814154 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1112 5 15722527 15727060 Apr5g1112 5 15722527 15727060 ECH