Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1107 ATGGAGCCTGGAATCGCCTTTTGGGGATCACCCAAAGGTACAAGGGAGCTGGTTATATTTGGGGTAGATGCTATTAAACCTTTTCTTGAAGTTGGAATAGTTTCTGCCAATGGAGAGGAATTGGTTCATAAAGTGGATGTAAAACTAGAGAGGTGCTGTCTTTGCCATGAGATAGGGGTCACACTCAGGTACATTGCAATATTACATTATTTTCCATTGATTATAGATTTAAACAGACTACTTAGAAATGGCCCATTAATCAAATATGGCAACAAGAAATATGCGAGGATTGGGATAATGCCGATATATGGCGATGCAGACTCAACCAAATGGTTTGAAGTGGAACCTAATACCACATTTCATCTCATCAATTCTTTCAAGGATGGTCATGAGTATGTAGGTGATGTTGTGGGGTTGCAGAGCGCTAGATTCAATAATTCCAGGACCTGGAGATGGTCTGAACGAATTCAAGTGGTTCTCTCGTTGATTGAACATGCAAATTGGAGAGTTTAA 513 0.4016 MEPGIAFWGSPKGTRELVIFGVDAIKPFLEVGIVSANGEELVHKVDVKLERCCLCHEIGVTLRYIAILHYFPLIIDLNRLLRNGPLIKYGNKKYARIGIMPIYGDADSTKWFEVEPNTTFHLINSFKDGHEYVGDVVGLQSARFNNSRTWRWSERIQVVLSLIEHANWRV* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1107 170 Pfam Retinal pigment epithelial membrane protein 13 143 IPR004294 GO:0016702
Apr5g1107 170 PANTHER DIOXYGENASE, PUTATIVE-RELATED 12 133 - -
Apr5g1107 170 PANTHER BETA-CAROTENE DIOXYGENASE 12 133 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1107 Apr-Chr5 15695806 15696903 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1107 - - aprc:113866188 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1107 5 15695806 15696903 Apr5g1107 5 15695806 15696903 ECH