Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1101 ATGGCTTTCACAGCCTCACCTTCTATAAGAAATTCCATTTCATGGCCAACTATGGTTGCTTCTGATAACATCAAAGACAGGTTTTCATTTCAAAACAAAAGCATCTTCATAGGCCAGCGCAATATTAGAGACTTAACTCTTGCAAATGTTGCAAGTCCATTACCTATGATTGCTCCACCACCACCGGAGGAACGGCCAGGGACCACCGGCGGCCGCCACCACCATGTTGCATGGACTAGTATTCAACAAGAGAGATGGGAAGGAGAGTTGCTTGTTCAGGGACAAATACCACTATGGCTGAAAGGAACGTACCTAAGGAATGGGCCAGGCATGTGGCACATAGGTAACTACAACTTCAGGCACCTCTTCGACGGTTACGCCACCCTCGTCAAGCTCCACTTCGAGAACGGCCGATTGATCGCCGGCCACCGGCAAGTCGAATCTCAGGCCTACCAAGCCGCAAAGAAGAACCAGAAAATCTGTTACCGTGAATTCTCCGAAGTGCCTAAGGCAGCGAACTTCTTGGCCTACGTGGGAGAACTTGCAAGCTTGTTCTCCGGCGCTTCACTCACCGACAATGCGAACACCGGCGTGGTGAAGCTCGGCGACGGGAGGGTGGTTTGTTTGACGGAGACTCAAAAAGGGTCGATACTGATAGAGCCTGAGACGTTGGACACGATTGGGAAATTTGAGTATAGTGATTCGTTGGGGGGTCTTATTCACTCTGCACACCCCATTGTGACGGATAAGGAGTTTTTGACTTTGTTACCTGATTTAGTGAAACCAGGGTATTTGGTGGTGAGGATGGAACCTGGCACCAATGAGAGAAGGGTTATTGGGCGGGTCAATTGTCGGGGCGGCCCAGCACCCGGTTGGGTCCATTCTTTCCCCGTTACTCAACATTATGTTATTGTGCCTGAAATGCCGTTGAGGTACTGTGCTCAGAATTTGCTCAAGGCTGAACCCACACCCTTGTACAAGTTTGAGTGGCACCCTCAGTCCAAAGCGTTTATGCATGTTATGTGCAAGACTAGTGGAAAGATTGTGGCAAGTGTGGAAGTGCCTCTCTTTGTTACTTTCCATTTCATAAATGCATATGAGGAGGAAGATGAAGATGGGAGGGTGAAGGCAATTATTGCTGACTGTTGTGAGCACAATTCAGATACTGCCATTCTTGATAAGCTTAGGTTGCAGAACCTTCGCTCATTTAATGGCGAGGATGTTCTACCAGATGCTAGGGTTGGTCGGTTCAGAATACCACTAGATGGAAGTCCATATGGAACATTAGAAGCAGCATTGGACCCAAATGAACATGGTAGAGGGACAGATATGTGCAGCATAAACCCTAATTATTTAGGAAAGAAATACAGATATGCCTATGCTTGTGGAGCAAAGCGCCCTTGTAACTTTCCCAACACCCTCACCAAGATTGATTTTGAATTGAAAAAGGCAAAGAACTGGCATGAAGAAGGTTCTGTGCCCTCAGAACCACTCTTTGTGGCACGACCAGGAGCAACAGAGGAAGATGATGGCGTGGTTATTTCCATAGTCAGTGAGAAAAATGGAGAAGGATTTGCTTTGTTGTTAGATGGTTCCACCTTTGAAGAGATTGCTAGGGCCAAGTTCCCTTATGGACTTCCATATGGGTTGCATGGATGCTGGGTACCAAAAGAGTAA 1677 0.4735 MAFTASPSIRNSISWPTMVASDNIKDRFSFQNKSIFIGQRNIRDLTLANVASPLPMIAPPPPEERPGTTGGRHHHVAWTSIQQERWEGELLVQGQIPLWLKGTYLRNGPGMWHIGNYNFRHLFDGYATLVKLHFENGRLIAGHRQVESQAYQAAKKNQKICYREFSEVPKAANFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSILIEPETLDTIGKFEYSDSLGGLIHSAHPIVTDKEFLTLLPDLVKPGYLVVRMEPGTNERRVIGRVNCRGGPAPGWVHSFPVTQHYVIVPEMPLRYCAQNLLKAEPTPLYKFEWHPQSKAFMHVMCKTSGKIVASVEVPLFVTFHFINAYEEEDEDGRVKAIIADCCEHNSDTAILDKLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPYGTLEAALDPNEHGRGTDMCSINPNYLGKKYRYAYACGAKRPCNFPNTLTKIDFELKKAKNWHEEGSVPSEPLFVARPGATEEDDGVVISIVSEKNGEGFALLLDGSTFEEIARAKFPYGLPYGLHGCWVPKE* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1101 558 PANTHER BETA-CAROTENE DIOXYGENASE 9 557 IPR004294 GO:0016702
Apr5g1101 558 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 9 557 - -
Apr5g1101 558 Pfam Retinal pigment epithelial membrane protein 82 556 IPR004294 GO:0016702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1101 K17913 - gmx:100814148 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1101 5 15632007 15634870 Apr5g1101 5 15632007 15634870 ECH