Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1100 ATGAGAGCGTTAAGAGCAGTGCTTCAGCTTCATACTTTTACAACTCGGGTTTCGCTATCATCTTCTCTCTTTCTTCGCGTTTCTGATTCAGGGAATTATACTACTTCGCTGCTCAAGAGCTTATCGTTGGATACAAATAGAACCTTCGCTGATAAGTGTCGAGTGAGAAAAATATGGACTTCCACTCCTCTTTGTATGGGAAGGCGTTCCAGCAAAATTGCTGGGAGAAAGGAAGCCCAAGATGCAAAGAAGGCAAAACTATACTCAAGGATTGGAAAGGAAGTTGTGTCTGCTGTAAAGAAAGGTGGTCCAAATATTACATCCAATTCAGTTTTGGCTGCTGTACTTGAGAAAGCCAAGGAGCTTGATGTGCCTAAAGATATTGTTGAGCGCAACATCAAGAGAGCTTCTGAAAAAGGACAAGAGGCTTACATCGAGAAAATCTATGAGGTTTATGGTTATGGTGGAGTTAGTATGGTGGTTGAGGTATCGACTGATAAGGTACATCGTTCTGTGGCAAAGATTAGAGAAGTGTTAAAAGACTATGGTGGAAAGATGGCGGATTCTGGATCTGTAACGTTTAAGTTTAGACGTGTTCGGGTAGTAAATGTTAAAGTCACCAATGCTGACAAAGATCAGCTGCTTACCATTGCTTTAGATGCTGGAGCTGAGGATGTAATTGAACCTCCAACTTATGAAGATGACACTGAAGAGGATAGGTCAGAAAGGTATTATAAAATTGTAGGTTCTTCAGATAACTATTCATCTATACTATCTAAGCTGCGGGAGGAGGGCATAGATTTTGAGCCTGACAATGGTTCTGAGCTTCTTCCAACTACCACTGTTCAGGTAGACGATGAGGCTATGGACTTGAACAAGGAACTCATGAGCAAATTACTTGAGCTTGACGATGTTGATGCTGTTTATATTGATCAGAAATAG 942 0.4108 MRALRAVLQLHTFTTRVSLSSSLFLRVSDSGNYTTSLLKSLSLDTNRTFADKCRVRKIWTSTPLCMGRRSSKIAGRKEAQDAKKAKLYSRIGKEVVSAVKKGGPNITSNSVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAYIEKIYEVYGYGGVSMVVEVSTDKVHRSVAKIREVLKDYGGKMADSGSVTFKFRRVRVVNVKVTNADKDQLLTIALDAGAEDVIEPPTYEDDTEEDRSERYYKIVGSSDNYSSILSKLREEGIDFEPDNGSELLPTTTVQVDDEAMDLNKELMSKLLELDDVDAVYIDQK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1100 313 Gene3D - 195 280 IPR026564 -
Apr5g1100 313 Gene3D - 81 142 IPR017856 -
Apr5g1100 313 Gene3D - 147 309 IPR026564 -
Apr5g1100 313 PANTHER UNCHARACTERIZED 27 313 IPR002876 -
Apr5g1100 313 SUPERFAMILY YebC-like 66 312 IPR029072 -
Apr5g1100 313 Hamap Probable transcriptional regulatory protein YebC [yebC]. 66 312 IPR002876 -
Apr5g1100 313 PANTHER TRANSLATIONAL ACTIVATOR OF CYTOCHROME C OXIDASE 1 27 313 - -
Apr5g1100 313 Pfam Transcriptional regulator 70 309 IPR002876 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1100 - - gmx:100795367 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1100 5 15626599 15631774 Apr5g1100 5 15626599 15631774 ECH