Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1096 ATGTTCTTTTCCAACCTTAAATCTAATCAACCTCGGAACCAGAAACAAAATGGAGAATGGTTAGCAGGAAGTTTCAAGCCAGAGAACTTCATTCCAGGTCTTGTTGTAGGTTTCATTTTTGGGTTGCTGTTAGATTTATCAAAGCGCCATGGAAATCACTTGCCCAAGAAATCTTTCTCATCTAGCAAGCATCAGCAGCAACTCTCAGTCTCAAGCAGTGGCGGTCAAGAACTTAAAATGGTTCTGGTTGTTAGGCAAGACCTAAAGATGAAATCTGGAAAGATTGCATCCCAATGTGCTCACGCTGCCACTGGCATGTACGCAGAATTAATGCAAAGCGATCGTTCTCTTTTGAGACGATGGGAACAGTGTGGCCAGCCCAAAATTGTTGTGACTTGCAGGAATCAACAGGAAATGAATAAACTAAAGGAAACAGCTGAAAGTATTGGTCTTCCTACTTTTGTCGTTGCTGATGCTGGACGAACACAGGTTTTGGCAGGATCAAAGACTGTACTTGCTGTTGGACCTGGACCAAAATCTTCTGTGGATTCTGTGACTGGGAGGTTAGCCCTGCTTTGA 579 0.4335 MFFSNLKSNQPRNQKQNGEWLAGSFKPENFIPGLVVGFIFGLLLDLSKRHGNHLPKKSFSSSKHQQQLSVSSSGGQELKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMQSDRSLLRRWEQCGQPKIVVTCRNQQEMNKLKETAESIGLPTFVVADAGRTQVLAGSKTVLAVGPGPKSSVDSVTGRLALL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1096 192 SUPERFAMILY Peptidyl-tRNA hydrolase II 77 192 IPR023476 -
Apr5g1096 192 CDD PTH2 79 192 IPR002833 GO:0004045
Apr5g1096 192 Gene3D Bit1 74 192 IPR023476 -
Apr5g1096 192 PANTHER PEPTIDYL-TRNA HYDROLASE 2 7 192 IPR002833 GO:0004045
Apr5g1096 192 TIGRFAM arch_pth2: peptidyl-tRNA hydrolase 78 192 IPR002833 GO:0004045
Apr5g1096 192 Pfam Peptidyl-tRNA hydrolase PTH2 78 192 IPR002833 GO:0004045
Apr5g1096 192 PANTHER PEPTIDYL-TRNA HYDROLASE 2, MITOCHONDRIAL 7 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1096 Apr-Chr5 15592870 15596113 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1096 K04794 - gmx:100527852 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1096 5 15592870 15596113 Apr5g1096 5 15592870 15596113 ECH