Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1089 ATGTCTTCCGCCGAGACGGAGATGGAGCCTCTCACGTCCGGTGCAAGCAATCGCATAATTCCGCTTCTCAAAGCCCTGAGGTCTTCGCTGATATTCGTCTACACCTACTTCCTCTCGTTCCTGTTGTTCGTTCTCCCCCGGCGCCGCCGCTTCTCCTCGACGCCGTCTTTGGCGGGACCACCGTCGCCGAAGAAGCATTTGAAGCGGCGGTGGCTGGTTCGGGAGGAGGAAGACACGTTCAGGAGAAGAGCGTTGGCGCAAGACGTGGGAATGGGTCGCGACGATGGATGTTGCCGGTGGAACACTTCTATTTTCTACGGTGTTAGAAACAACGCTCTGTTTTGCCGATCGTGGTTCCCGGTCACCGGTCATGTTAAGGGCATTCTGATCATCATTCATGGGCTTAATGAACACAGTGGAAGATATGCGGACTTTGCAAGGCAATTAACATCTCGCAACTTTGGTGTCTACGCAATGGACTGGATAGGTCATGGAGGTAGTGATGGATTGCATGGTTATGTTCCTTCTCTTGATCATGTGGTTGCAGACACAGGGGCTTTCTTAGAAAAGATTAAATCAGATAATCCTGGGATACCGAGCTTTCTCTTTGGTCACTCCACTGGAGGGGCTGTGGTGTTGAAAGCAGCCTCCCATCCTCATATTGAAGTAATGGCGGAGGGAATTATATTAACCTCGCCAGCTTTGCGTGTGAAGCCAGCTCATCCTATTGTTGGTGCTGTTGCTCCATTTTTTTCTCTGGTAGCTCCTAAATTCCAATTTAAAGGAGCAAACAAAAGGGGCATTCCAGTTTCAAGGGACCCAGCAGCTTTGTTGGCAAAGTACTCTGATCCTTTGGTCTACACAGGACCTATAAGGGTCAGAACTGGTCATGAAATATTGCGGATATCCTCGTACTTAATGCGAAACTTCAAGTCTGTGACAGTGCCATTCTTTGTCCTCCACGGAACTGCTGATAAGGTAACTGATCCACTGGCCTCACAAGATCTCTACAATGAGGCAGCTTCGGAGTTCAAAGACATAAAGCTTTATGATGGATTCTTGCACGACCTTTTGTTTGAACCTGAGCGTGAAGAGATAGCTCTGGACATTATCAACTGGATGGAAAAGAGATTATTTACTATTTGA 1146 0.4825 MSSAETEMEPLTSGASNRIIPLLKALRSSLIFVYTYFLSFLLFVLPRRRRFSSTPSLAGPPSPKKHLKRRWLVREEEDTFRRRALAQDVGMGRDDGCCRWNTSIFYGVRNNALFCRSWFPVTGHVKGILIIIHGLNEHSGRYADFARQLTSRNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKSDNPGIPSFLFGHSTGGAVVLKAASHPHIEVMAEGIILTSPALRVKPAHPIVGAVAPFFSLVAPKFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLMRNFKSVTVPFFVLHGTADKVTDPLASQDLYNEAASEFKDIKLYDGFLHDLLFEPEREEIALDIINWMEKRLFTI* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1089 381 Gene3D alpha/beta hydrolase 100 378 IPR029058 -
Apr5g1089 381 SUPERFAMILY alpha/beta-Hydrolases 110 378 IPR029058 -
Apr5g1089 381 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 63 378 - -
Apr5g1089 381 Pfam Serine aminopeptidase, S33 124 362 IPR022742 -
Apr5g1089 381 PANTHER PHOSPHOLIPASE-RELATED 63 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1089 Apr-Chr5 15522986 15527230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1089 1 298 Acyl Lipid Metabolism Gene Families AT5G11650 67.657 3.04e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1089 - K01054 gmx:100816265 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1089 5 15522986 15527230 Apr5g1089 5 15522986 15527230 ECH