Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1085 ATGGACCGCTTACGTCCTCGGAACAAAGTGGTCTTTTCTGGATTTATGAATTCCGAGATTGAGAAAATGGAGAAATTGCTAAGGGAACCCAAAGGACAATCATTGAGCAAGGAATTTTACCAAAAGCTTGCTACAAGTTTCAACCGTTCCTCTGCTCGTGCTGGGAAACCTATCATAAAATGGACAGAGATTCAAAATTGGTTTCAGACTAGGCTCCAAGACTCACCACAAGTTCCTAATTGTGAATTGATGTTTCCTAAAGGCCTTGGATGTAAGGAAGGAGACATGATGATAGACCCATCAGAGATGGAATTTGAAGCAAGGTCATCAAAAGATGGAGCATGGTATGATGTTGAGGCATTTCTAGCTCACAGATTTCTTAGCTCGGGGGAAGCTGAAGTCCATGTCAGATTTATTGGATTTGGAGCTGAGGAAGATGAATGGGTTAATATAAAAAATTCAGTCCGAGAGCGCTCTGTACCTTTGGAAAACAAAGAATGTTCTAACCTCAAAGTTGGAGACCCCGTCCTGTGCTTCCAGGAGAGGAGAGATCAAGCAATTTACTACGATGCTCACATTTTGGAGATCCAGAGGAGAATGCATGATATTAGAGGTTGCAGGTGTCTCATCTTAATTCGTTATGATCATGACAACAGTGAGGAAAGAGTCCACTTGAGGAGACTTTGTCGTAGACCAAGATCTTAG 705 0.4213 MDRLRPRNKVVFSGFMNSEIEKMEKLLREPKGQSLSKEFYQKLATSFNRSSARAGKPIIKWTEIQNWFQTRLQDSPQVPNCELMFPKGLGCKEGDMMIDPSEMEFEARSSKDGAWYDVEAFLAHRFLSSGEAEVHVRFIGFGAEEDEWVNIKNSVRERSVPLENKECSNLKVGDPVLCFQERRDQAIYYDAHILEIQRRMHDIRGCRCLILIRYDHDNSEERVHLRRLCRRPRS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1085 234 Gene3D - 162 234 - -
Apr5g1085 234 Gene3D - 100 161 - -
Apr5g1085 234 Pfam SAWADEE domain 102 229 IPR032001 GO:0003682
Apr5g1085 234 PANTHER OS09G0346900 PROTEIN 9 233 - -
Apr5g1085 234 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 9 233 IPR039276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1085 Apr-Chr5 15497941 15501755 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1085 - - gmx:100817690 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1085 5 15497941 15501755 Apr5g1085 5 15497941 15501755 ECH