Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1083 ATGGACGAAGAGGAGAGACAGAGACTCCTCGAAAGGGAGAGATTCCAGATCCAACTCATTCGCCAGCTCGATCTCGAAGACCTCGAGGTTGAAGAAGTCGATGACTCCGACTCCGACTCTGATTCCGATTCCGACGAGTCTACGTATTTCCTTCCACCTAGTTCTGACGGCGTTGCTGCTACCTCATCCGATGAATTCACTTTCAATACCTATATCGCGCCTCTGCACACCTATCTCGGTGATGTTGAAGACACGCGCCACAGGACTACTCTCTTGGACGGTGGTGCTATATTGAACATTCCACTGTTCTGTCTCGAAGGAGTTGTACTCTTTCCGGGGGCTACACTTCCCCTTAGAGTTATTCAATCCCATTTAGTGGCTGCTGTTGAGAAAGCTTTGAGCGAATCTGATATTCGTAACACTATTGGTGTGATTCGCAGGTACAGGGATACTGCAAGTCGTAGGATGAAATCAGTAAGCATTGGGACAACTGCTGAGATTCGACAATATGGCCACATGGACGATGGTTCACTGAATGTCGTTACCCGGGGACAACAAAGATTTCGCCTAAGACGGAGCTGGCATGATGCAGAAGGAGTGCCTTATGGAGAGATCCAAATTATTGACGAAGATCTACCACTAAGACCTCCAAGGGATGCTTTTGGTAAATTAGCACCATTGAGTAATATGCCCCGTAGCCAAGCTACCTCATATACATTGTCTCCAAAGTATTCCCATGTTAAAATGCACAGCTCAAAAAATGAGGAAAGTGATTCACAAGCAAATTCAGAAGAGAGTTTTGAGAGTGAGCTATCACTAATGGAAAGAAAGATCCATGAATCAGCTATTGGATCCAGTTATGTGCATGATATGATGGATGAATCAGCAAACAAAAGTGATGTTAACTTCATGCATAAGTCAGATCAGGAAATTAGATCCAGTCTGGATCCGGGAGCTGGGAACTGCTCCACTTCTGGAGAGCAGTCATCAAAAGAAGAGCTTAACAGATGTTGTAAAAGTACATATGCCTACCCATCTCATAAAATTTCAAAAGCATTCTTGCCCCACTGGGCATATCGTATGTTTGACTCTTTTTGGCTCGCACAAAGGGCAGCAGATATGTGGAAGCGAATAGTGGCGGTGCCTAGCATGGATAGTCTTATTCAGAAACCTGATGTTTTATCATTTCACATTGCTAGTAAAATACCTGTGTCAGAATCTACAAGGCAAGAGCTTTTGGAAATTGATGGAATTGCATATAGGTTGCGCAGAGAAATTGAATTACTAGAGAGCCTTGATCTTATCCGATGTAAATGCTGCCAGACTATAATTGCAAAACGAAGTGATATGTTGGTGATGTCAAGTGAGGGTCCTCTTAGTGCATACGTGAATCTAGGTGGTCATGTGCATGAGATAATGACCCTTTACAAGGCAAATGGCTTAGCTCTCATTGGGCCAGCAGTTGCAGAATACAGTTGGTTTCCTGGGTATGCATGGACAATCGCTACTTGTGGAACATGTGAAACCCAAATGGGTTGGCTTTTTACAGCCAGAAACCAAAAATTGAGACCCAGCTCGTTTTGGGGGATTCGGAGCTGTCAAGTTGCAGAAGAAATACGCCGAAACCTTTAA 1632 0.4418 MDEEERQRLLERERFQIQLIRQLDLEDLEVEEVDDSDSDSDSDSDESTYFLPPSSDGVAATSSDEFTFNTYIAPLHTYLGDVEDTRHRTTLLDGGAILNIPLFCLEGVVLFPGATLPLRVIQSHLVAAVEKALSESDIRNTIGVIRRYRDTASRRMKSVSIGTTAEIRQYGHMDDGSLNVVTRGQQRFRLRRSWHDAEGVPYGEIQIIDEDLPLRPPRDAFGKLAPLSNMPRSQATSYTLSPKYSHVKMHSSKNEESDSQANSEESFESELSLMERKIHESAIGSSYVHDMMDESANKSDVNFMHKSDQEIRSSLDPGAGNCSTSGEQSSKEELNRCCKSTYAYPSHKISKAFLPHWAYRMFDSFWLAQRAADMWKRIVAVPSMDSLIQKPDVLSFHIASKIPVSESTRQELLEIDGIAYRLRREIELLESLDLIRCKCCQTIIAKRSDMLVMSSEGPLSAYVNLGGHVHEIMTLYKANGLALIGPAVAEYSWFPGYAWTIATCGTCETQMGWLFTARNQKLRPSSFWGIRSCQVAEEIRRNL* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1083 543 ProSiteProfiles Lon N-terminal domain profile. 100 431 IPR003111 -
Apr5g1083 543 SUPERFAMILY PUA domain-like 99 430 IPR015947 -
Apr5g1083 543 Gene3D - 80 208 IPR046336 -
Apr5g1083 543 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 435 525 IPR004910 -
Apr5g1083 543 Gene3D - 363 427 - -
Apr5g1083 543 Gene3D Peptide methionine sulfoxide reductase. 428 542 - -
Apr5g1083 543 MobiDBLite consensus disorder prediction 244 268 - -
Apr5g1083 543 Pfam ATP-dependent protease La (LON) substrate-binding domain 99 430 IPR003111 -
Apr5g1083 543 PANTHER CEREBLON 7 536 - -
Apr5g1083 543 MobiDBLite consensus disorder prediction 30 58 - -
Apr5g1083 543 CDD CRBN_C_like 435 531 IPR034750 -
Apr5g1083 543 MobiDBLite consensus disorder prediction 30 44 - -
Apr5g1083 543 ProSiteProfiles CULT domain profile. 432 539 IPR034750 -
Apr5g1083 543 PANTHER BNAA09G40760D PROTEIN 7 536 - -
Apr5g1083 543 SMART lon_5 99 431 IPR003111 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1083 K11793 - gmx:100779918 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1083 5 15479673 15485659 Apr5g1083 5 15479673 15485659 ECH