Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1080 ATGGAAGTTGAAGCGGGTAAAGGTGTTTCTAGTTGTGGGAGAGACCCAAGTGCGGAACTGGATGATGATGGGAGAATCAAAAGAACAGGGAACGTGTTGACGGCTACGACGCACATAGTAACGGTGGTGGTAGGAGCAGGAGTGTTGGCTCTTGCATGGGCCATGGCTCAGCTTGGATGGATACCTGGCATCTCCGTCATGCTCATCTTTGCATGCATTTCCATTTACACTTACAATCTTATCGCTGATTGCTATAGATATCCAGATCCAGTTAGTGGCAAGAGGAACTACACTTACATGCAGGCCGTTGATGCATACCTTGGTGGAACAATGCATGTGTTCTGCGGATTAGTCCAATATGGGAAGCTCGCTGGGATTACAGTGGGGTACACTATAACTACTTCTACAAGCTTGGTGGCTATTAAGAAAGCAATATGCTTCCACAAAAGAGGCCACAAAGCTTATTGCAAGTTTTCAAATAATCCCTACATGATTGGTTTTGGGATGTTGCAAATTTTATTGTCTCAAATCCCAAATTTCCACAAGTTAACTTGTCTTTCAACCATTGCTGCTGCTAGCTCTTTTGGTTATGCATTAATTGGAAGTGGGCTTTCTCTGGCTGTCGTGGTCTCAGGGAAAGGAAAAGCGACTAGATTATTTGGAACCAAAGTAGGGCCAGAACTATCTGAAGAAGAAAAAGTTTGGAGGGTTTTCAGCGCTTTGGGAAACATTGCACTTGCTTGCTCTTATGCTACTGTTGTTTACGATATAATGGACACATTGAAGTCATATCCACCAGAAAACAAACAGATGAAAAAGGCCAATGTGTTAGGAATCACAGCAATGACTACACTTTTCATCCTATGCGGTGGCCTTGGCTATGCTGCTTTCGGTGATCACACACCGGGAAACATACTCACTGGCTTTGGATTTTACGAACCCTTTTGGTTGGTCGCCCTTGGGAATGTGTGCATTGTAATCCACATGGTGGGGGCATACCAGGTACTTGCTCAACCACTGTATCGTATAATTGAGATGGGTGCTAACTTGGTGTGGCCACGTTCAGTTTTCATAAACAAGGAATACCCAACCAAAATGGGCACTTTGACATTCAGTTTGAATTTGTTTAGGCTAATTTGGAGGACAATATACGTGATAGTGGCCACAATTATTGCCATGGCAATGCCGTTTTTCAATGAGTTTCTTGCCCTGCTTGGAGCAATTGGGTTTTGGCCTCTCATCGTCTTTTTCCCTATACAAATGCACATTGCACAGAAACAAATCAGAAGACTATCATTGAAGTGGTGTGTGCTCCAACTATTGAGCTTCGTGTGCTTCCTTGTTTCAGTTCCTGCGGCCGTTGGTTCCATTCGTGCAATTAGCAAGAATATCAAAAAATACAAACTTTTCATGTATAAACAGTAG 1425 0.433 MEVEAGKGVSSCGRDPSAELDDDGRIKRTGNVLTATTHIVTVVVGAGVLALAWAMAQLGWIPGISVMLIFACISIYTYNLIADCYRYPDPVSGKRNYTYMQAVDAYLGGTMHVFCGLVQYGKLAGITVGYTITTSTSLVAIKKAICFHKRGHKAYCKFSNNPYMIGFGMLQILLSQIPNFHKLTCLSTIAAASSFGYALIGSGLSLAVVVSGKGKATRLFGTKVGPELSEEEKVWRVFSALGNIALACSYATVVYDIMDTLKSYPPENKQMKKANVLGITAMTTLFILCGGLGYAAFGDHTPGNILTGFGFYEPFWLVALGNVCIVIHMVGAYQVLAQPLYRIIEMGANLVWPRSVFINKEYPTKMGTLTFSLNLFRLIWRTIYVIVATIIAMAMPFFNEFLALLGAIGFWPLIVFFPIQMHIAQKQIRRLSLKWCVLQLLSFVCFLVSVPAAVGSIRAISKNIKKYKLFMYKQ* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1080 474 Pfam Transmembrane amino acid transporter protein 29 458 IPR013057 -
Apr5g1080 474 MobiDBLite consensus disorder prediction 1 23 - -
Apr5g1080 474 PANTHER OS05G0424000 PROTEIN-RELATED 2 469 - -
Apr5g1080 474 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 2 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1080 Apr-Chr5 15453574 15457625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1080 15 470 Organic Solute Cotransporters AT1G58360 53.611 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1080 K24917 - gmx:100802090 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1080 5 15453574 15457625 Apr5g1080 5 15453574 15457625 ECH