Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1079 ATGGACATTGAAGCAGGTAAGGACCCTCCAATGAGAGTCTCAAGGGAGGAAGTGGATGATGATGGGAGAGTCAGAAGAACTGGGAACGTGTTGACGGCTACGACACACATAATAACGGTGGTGGTAGGAGCAGGAGTGTTGGCTCTTGCATGGGCCATGTCTCAGCTTGGATGGATAGCTGGCATCGCCGTCATGCTCGTCTTTGCATGCATTTCCATTTACACTTACAATCTTATAGCTGACTGCTATAGATATCCAGACCCAGTTAGTGGCAAGAGGAACTACACTTACATGCAGGCTGTGGATGCATACCTAGGTGGAAAAATGCACGTGTTTTGCGGATTGGTCCTATATGGGAAGCTCGCAGGGGTTACGGTGGGGTACACTATAACTAGTTCTACAAGCTTGGTGGCTATTAAGAAAGCAATTTGCTTCCACAATAGGGGCCATGCAGCTTACTGCAAGTTTTCAAATAACCCCTATATGGTAGGTTTTGGCATCGTGCAAATTTTGTTGTCTCAAATCCCAAATTTCCACAAGTTAACGTGGCTTTCAACCCTTGCTGCCGCTACCTCTTTCGGTTATGCATTCATTGGAAGTGGGCTTTCTCTGGCAGTCGTGGTCTCAGGTAAAGGAAGATCAACCAGTATATTTGGAAACAAAGTAGGACCAGAACTATCTGAAGAAGAAAAAGTTTGGAGGGTGTTCAGTGCTTTGGGAAACATTGCGCTTGCTTCCTCTTTTGCCACTGTTATTTATGATATAATGGACACATTGAAGTCATATCCACCAGAAAACAAACAGATGAAAAAGGCCAATGTGTTAGGCATCTCAGCAATGACAATACTCTTCCTCCTATGTGGTAGCCTTGGTTATGCTGCTTTTGGTGATCACACGCCGGGAAACATCCTCACTGGCTTTGGATTTTACGAACCCTTCTGGTTGGTCGCTATTGGAAATGTGTGCATTATAATCCACATGCTCGGAGCATATCAGGTGATGGCTCAACCACTATTTCGTATAATTGAGATGGGTGCTAACATAGCGTGGCCGCGTTCAGATTTCATTAACAAGGAATACCCGATCAAAATTTGCTCCTTAAGATTCAATATAAGTTTCTTCAGGCTAATTTGGAGGACAATATACGTGATAGTGGCCACAATTGTTGCCATGGCAATTCCATTTTTCAATGAGTTTCTTGCCCTGCTTGGAGCAATTGGGTTTTGGCCTCTCATCGTCTTTTTCCCTATACAAATGCACATTGCACAGAGACAAATAAGAAGACTATCATTGAAGTGGTGTGCGCTCCATGTGTTGAGCTTCGCGTGCTTCCTAGTCTCAGTAAGTGCAGCAGTTGGTTCAGTTCATGGAATTAGCAAGAATGTCAAAAAATATAGACTTTTCAGGTATAAACAATAG 1419 0.4376 MDIEAGKDPPMRVSREEVDDDGRVRRTGNVLTATTHIITVVVGAGVLALAWAMSQLGWIAGIAVMLVFACISIYTYNLIADCYRYPDPVSGKRNYTYMQAVDAYLGGKMHVFCGLVLYGKLAGVTVGYTITSSTSLVAIKKAICFHNRGHAAYCKFSNNPYMVGFGIVQILLSQIPNFHKLTWLSTLAAATSFGYAFIGSGLSLAVVVSGKGRSTSIFGNKVGPELSEEEKVWRVFSALGNIALASSFATVIYDIMDTLKSYPPENKQMKKANVLGISAMTILFLLCGSLGYAAFGDHTPGNILTGFGFYEPFWLVAIGNVCIIIHMLGAYQVMAQPLFRIIEMGANIAWPRSDFINKEYPIKICSLRFNISFFRLIWRTIYVIVATIVAMAIPFFNEFLALLGAIGFWPLIVFFPIQMHIAQRQIRRLSLKWCALHVLSFACFLVSVSAAVGSVHGISKNVKKYRLFRYKQ* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1079 472 Pfam Transmembrane amino acid transporter protein 27 458 IPR013057 -
Apr5g1079 472 PANTHER OS05G0424000 PROTEIN-RELATED 2 466 - -
Apr5g1079 472 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 2 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1079 Apr-Chr5 15443152 15449728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1079 4 469 Organic Solute Cotransporters AT1G58360 53.319 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1079 K24917 - gmx:100780988 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1079 5 15443152 15449728 Apr5g1079 5 15443152 15449728 ECH