Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1078 ATGGAAGTGGAATCCGGGGTTAGTCCTGCAGCTTCGAGTGCTCTTCTTGACGATGATGGAAAACTCAAAAGAACTGGAACAGTGTGGACTGCGAGCGCACATATAATAACGGCAGTGGTTGGAGTTGGAGTACTGTCTTTACCATGGGCCATGGCCCAATTGGGATGGATCCTCGGCGTAGTCTCAATCTTTTTCTTTGCTTTGGTTACCCTCTACACTTCAAATCTCTTAACCGATTGTTATCGCTCACCCAATCCTGTTGGTGGCAAAAGGAACTACACTTATATGGACACTGTCCAAACTCACTTAGGTGGAAAAATGCATGTCTTTTGTGGATTGGTCCAGTTAGGCAATCTTGCTGGATTTACAATCGGTTTCACTATAACAACATCTATGAGTGTCGTGACGATACTAAAGAACTATTGCGTTCGCAAGAGTGGGATTGAGGCATCTCCATGCCATTTTTCTAATAATCCGTACATGATTACTTTTGGAATCATTGAAATTGTTTTGTCTCAAATCCCCAATTTTCACAAGTTGTCTTTGCTCTCAACCTTAGCAGCTATCGTGTCTTTTGGGTACGCATTCATTGGTATTGGACTTTCTCTTGCAACAGTTATCAAAGGTAATGGAAAGAGTACCTCTTTTTTTGGTGGCATGGAGCATAGTTCAGCAGACAAATTGTGGAATATGTGCGTCGCACTTGGAAACATTGCACTTGCCTGTGACTATGCTCAAATTGCGATTGATATTCAGGATAGTTTAAAGTCATCACCACCAGAGAATAAAGTGATGAAAATGGCAAATAGGATAGCTATATTCACGATGACAAATATTTTCCTCTTATCTGCATGCTTTGGATACGCTGCATTTGGGTCAGACACTCCAGGGAACATCCTCAAGAGCTCGGGCTTTCAAAACCCTTTCTGGCTTGTGGACTTAGCCAATCTCTTCATTATTGTGCACCTAGTTGGAGCATATCAGGTAGTGATCCAACCTTTTTATCGTATAGTTGAATTATTGGCTGGGCAAACGTGGCCAAGCTCAAGCTTTATAACAAGGGAGAAGCTCGTAAGCATTGGCAAAATTAAATTCAGCATCAATTTCTTTAGGCTAATTTGGAGGTCCATCTATGTGGTGCTTATCACTGTATTGGCCATGGCAATGCCCTTTTTCAATGAGATGATTGCCCTTCTTGGGGCCATTGGCTTCTGGCCTACAGCAGTCTTCTTTCCAGTGCAAATGTTCATTGTCAGACATAATATTAAAAAACTATCGTTTCAATGGTTTAGACTTCAAATGTTGAGCTTTGTGTGCTTGATTGTATCGTTGGTTGCAGTATGTGGAGCTATTCATGGATTAAGCCATGCTCTTGGTAAATACAAGCCCTTTATGTATAAGGAATAG 1407 0.4151 MEVESGVSPAASSALLDDDGKLKRTGTVWTASAHIITAVVGVGVLSLPWAMAQLGWILGVVSIFFFALVTLYTSNLLTDCYRSPNPVGGKRNYTYMDTVQTHLGGKMHVFCGLVQLGNLAGFTIGFTITTSMSVVTILKNYCVRKSGIEASPCHFSNNPYMITFGIIEIVLSQIPNFHKLSLLSTLAAIVSFGYAFIGIGLSLATVIKGNGKSTSFFGGMEHSSADKLWNMCVALGNIALACDYAQIAIDIQDSLKSSPPENKVMKMANRIAIFTMTNIFLLSACFGYAAFGSDTPGNILKSSGFQNPFWLVDLANLFIIVHLVGAYQVVIQPFYRIVELLAGQTWPSSSFITREKLVSIGKIKFSINFFRLIWRSIYVVLITVLAMAMPFFNEMIALLGAIGFWPTAVFFPVQMFIVRHNIKKLSFQWFRLQMLSFVCLIVSLVAVCGAIHGLSHALGKYKPFMYKE* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1078 468 PANTHER OS05G0424000 PROTEIN-RELATED 10 461 - -
Apr5g1078 468 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 10 461 - -
Apr5g1078 468 Pfam Transmembrane amino acid transporter protein 24 452 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1078 Apr-Chr5 15436759 15440500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1078 3 464 Organic Solute Cotransporters AT1G10010 51.496 2.78e-169 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1078 K24917 - gmx:100804643 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1078 5 15436759 15440500 Apr5g1078 5 15436759 15440500 ECH