Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1072 ATGTTCTCAATTGCAGCAATCAATGATACGGACTCTAAAAGTCAGTGGGAGCCATTGGCTCCCACGAAAGAAGCTCAGGAATTTCATCTTTCTCAAACTTATCATGAAGGACTCCTCAAGTTACAAGCAAAAGAATATGAAAAGGCTCGCGAGCTTTTAGAATCTGTCCTTAAAGATCCTCTTATTGCTAATGCTCAGGTGGATAGAAGTGCAAGTGATGGTCATCTATTGCAACTCAGATTTTTGGCATTGAAAAACCTTGCCGCTGTTTTTCTTCAGCAAGGTTCTACACATTATGAGAATGCTTTACACTGTTATCTTCAAGCGGTGGAGATTGATTCAAAAGATTCTGTTGTCTGGAACCAACTGGGAACATTGTCATGCTCAATGGGCTCACTGAGTATTTCACGTTGGGCATTTGAGCAAGGCCTCTTATGTAGCCCTAATAACTGGAATTGCATGGAGAAGCTTTTGGAAGTTCTTATTGCAATTGGTGATGAGGTTGCTTGCCTTTCTGTTGCTGAGTTGATTTTGAGGCATTGGCCATCACATTCTCGTGCTTTGCATGTTAGAAATACCATTGAAGAATCAGAACCGTTGCCATTTGCTCCTAGAGGCATAGACAAATTAGAACCTAAACATATGCGGCTCAAATTTCCTGACAAGAGAAAAGCTACTAATGAGAAAGTAGACGAGGATGTTGCATTCAAAAAGCTGAAACAGAATAAAGAACTGCATCTGACAGAAGCTTCCTGGGTGGCTCTTACTGATGCTCTTCTGGAAATCTTATCGCCACAAAGTTCTGAGATAAATCCTGAAAAAGCTTGCTGTTCTCCTGATATTATGCTAAACATAAACTTACCTTCTAGCTCTGAAGCTGTTATGAATACTATGGAAATGAAAGGGTCCAGTGGTGAAAGTAGTGCTTTTAGTGATGGTAGCATAGAACGGTCAAGTAATTTTAAAGAGAAAGAAGCAAATATCCAAGAAGAACAACCACATGAAAGACGGAGTTCTCGACTTGAAAGGCTCCGAAGTCGTAAACCAGGGAAAGAAGAATCTGATTCTTCCTGTGGCAAGGACCGTGCCAAGGTTGTTATTCAATATCTAGAGCCATTTATTGCTGGTGGATTGGGGGGTCGAGGTACTATTCATCGTGATACCACAACACTATCCTGTTTAGGAAATTCTGAATATAATAATGTTTCTGCATTTTTAAAAGAAACATCAAACAATTATGGTGCTTACCATATGGCGCACTTGCTTTTGGAAGAGGTTGCTAGACAGGGCCTCACATATCAGGATGCTTTAGTCAAATTTCTAGAGTTAGAAAAGCTGACAAGGCACTGGGGAAAGGAGAGAACTGCTGAATGTAATATTTTTCTTGCTGAGCTGTATTATGACTTTGGATCATGCTCCCCCAATGGTTCTAAACAATTAGAATTTATTTCAGAAACATCTTATCATCTTTGTAAGATCATAGAATCTGTAGCTCTAGATTATCCTTTTCACTTGACCCATGCCTTGAATAAAGGTTGTTTTCTGATTGATAGTATCCAAGAGACCAGTGGAACAACAATAGATACCGCTACTGAGAGCAATTATTCAAATTTAGATAGCTCATTCCTGAGGAAAAACAGGTCCTTCTGGGCTCGATTCTTCTGGTTAAGTGGGAGATTGTCTATTTTTGATGGCAACAGGGCAAAAGCTTGTGAAGAATTTTGTATTGCGTTGTCACTTTTGGCGAAGAGTGAAAACATGGAAGATTCTCTATGTTCAGTGCCCCGACAACATTGCAAGGCTGTAAAAGAGCTAAACATTGATAGAGTTCTTTATGAAATTAATATATTGAAGGTCAATTTCTTGATGGAAAAGTCTATCATTAAGATGATGGAAGAAGGAAATTTTTTGGAATGTGTATCCTTGCTTTCTCCCCTTCTGTTCTCCACACAGGATGTCTACCCTGATTCATTCTCTTCATCCATGGCAGAGAAAAAAGATGAAAAGAGAAGTTCCATTGAACTCAGGGCTCTAGATGTTCTAATAGAAGCATGTCAAAAGGCAAGGCCAATGGATGTAGAGATGTATTTCAATTGCCATTATAGAAAGCTGAAAATACTTATGGCAATGATGGGTTTGAATAAATGTATTACGTCATTCAAATATTCTGATCAAACACTTGGTTTAAGTGCATCTCCTAATTTTGATACTGATTCAAAGGAAAGTTCTAGCAAACACTGTAGTCACTTGGTTGCAGAGGAAGTGAAGGCACTCTCTGACTGTATCTCACAAGTGAAAAAAGTTATTGATCATCGTGGAGATTCTGATGGCCTTGCTGTTCCATCGAGTAGCATTTGTCAAATGCACTCTCTGTTGTTGTTAATCATGAGCTATGTTGCCAGCATAGTTGTCTGCAACAAAGCCTCAGCACAAGAAATTTCTGATCAAGCTGAAAGCATCTGTTTCATTGATGCATCAATTGTTTTCTGCAAACTCCAGCATCTTGATCCAACCACACCTATCAAAACTCAAGTTGATTTAATTGTCGCAATGCATGACTTGCTTGCTGAGTATGGGCTTTGTTGTGTGGGTGAAGGCGGAAAAGGTGAAGAAAGAACATTTCTTAGGTTTGCAATAAAGCATCTCTTGGCCTTGGATATGAAGCTTAAATCCAGCTTTAACCATAAGGAATCAATGCGATGTGAAGAAGTGTCCAAAAACAGTCTTGTCAATGTTTCTGTTGAAGAATCAAAATCTGATATGTTAGATATCCGGATGGATTGGACCAAAATTGATGAAATTAGTTCTGTGAAAAAGGATGGTGAAAGTTCAAGCAGTCAACTGATTGAATGTGGAAATGAACTTTCTGAAGAAGAAAGGGAGGAACTTGAGTCTAAAATTGACAATGCTTTAGATCAGTGCTTTTTCTGTTTATATGGTTTAAATCTAAGATCTGATTCATCTTATGAAGATGATCTAGTGATGCACAAAAATACAAGCCGAGGAGACTATCAAAGCAAGGAACAATGTGCTGATGTTTTCAAGTATGTTCTTCCCTATGCAAAGGCATCTTCTAGGACTGGACTGGTCAAACTTCGGAGAGTTTTAAGAGCTATTAGGAAGCACTTTCTGCAGCCACCTGAAGATCTCTTGGCTGGAAACCCTATTGATAAGTTCCTAGATGATCCTAATCTATGTGAAGATAAACTCTCAGAGGAGGCTGGGTCTGATGGATTTCTTGAAACTATTACTAAGATCATGTTTCCTGATGTGGGTGGCCTTGCACAGTATAATGCAACATTATTGAAGAGGTCTGAGCCATATTTGGAGGTTTACTGTAACTTGTATTATTTCTTGGCTCTGTCTGAGGAAATGAGTGCAACTGATAAATGGCCTGGATTTGTGCTGACTAAGGAAGGGGAAGAATTTGTTGAACAAAATGCAAAGCTCTTCAAATATGATCTCATGTACAATCCTCTGCGCTTTGAAAGCTGGCAGCGACTTGGGAATATTTATGATGAGGAAGTAGATTTGTTGCTAAATGATGGTAGCAAGCACATTAATGTAGTAGGATGGAGGAAGACTACTACTTTATCTGAGAGAGTGGAAACAAGCCGAAGGAGGAGTAGACGGTGCCTACTAATGAGTTTAGCTTTGGCAAAGACATCTACTCAGCAGTGTGAGATACATGAGTTATTGGCATTGGTATACTACGACAGCCTGCAAAATGTCGTCCCATTTTATGATCAAAGATCTGTTTTGCCCTTAAAGGATGCGGCCTGGATGATGTTTTGTGAGAACTCAATGAAACATTTTAAGAAAGCCTTCACGCTTAAGCAGGATTGGTTACATGCATTTTACTTGGGTAAACTCAGTGAAAAACTTGGGTATTCACATGAAATAGCATTATCATATTACAACAAAGCCATTGCTTTGAACATATCAGCTGTTGATCCTGTCTATAGGATGCATGCCTCACGGTTGAAGTTATTATTTAAGTGTGGAAAACAGAATTTGGAGATTTTGAAGGTTCTTTCAGCAAACTCCTTTAATCAATCTCTAAAAGAAGCTGTCACAAGTATCCTTGGTGATTTGGGTTGCTTATCATTTAACACAAAGGAGATATGTACTCATGCCAATTTTGTGGAAACAAAGCATGAAGAGCTACTCAAATTGGATAAAGTATGGTCCATGATTTACAATGACTGCCTTTCTGCTCTTGAAACTTGTGTAGAGGGCGATCTCAAACATTTTCATAAGGCCAGATACATGCTGGCTCAAGGGCTGTATAAAAGAGGCGAGAACGGTGATATAGAGAGGGCAAAAGATCATTTATCTTTCTGCTTCAAATCTTCACGCTCATCATTTACAATAAATATGTGGGAAATTGATAGCATGGTCAAAAAAGGAAGGCGCAAGGCACCAGGTTCTGCTTGTAACAAAAAAGCCCTTGAGGTTAACTTACCAGAAAGTTCTCGAAAATTTATTACTTGCATTCGAAAGTATGTGCTATTTTATCTCAAACTATTGGAGGAGACTGGAGATAGATGTATTCTTGAACGTGCGTATGTTTCTCTTCGAGGAGATAAACGGTTTTCATTATGCATTGAAGATCTTGTACCTGTGGCTATTGGAAGGTATCTAAAAGCCCTGATTTCAACTATGTGCCATTGTCAGACTACTGCCTCTGGTTCAGTGAGCTGTTCTGACAATATGCTGGAGAAAATGTTTGCATTGTTCATGGAGCAAGGGAGCTTATGGCCAGAAATATGCAGCTTGCATGAAATTGAGGGCCCCAATATGTCAGAGAATATCATATATGGATATCTTCATGAATACATTGTATTATTGGAGAAAATTGGAAAATTGGAAACTCTTGAAGCAATAAATGAGAAGATTCGGAAACGTTTCAAGAATCCTAAGTTCTCGAATAGTAATTGTGGAAAAGTTTGCAGGCATGCTTCTGTTGCTTGGTGCCGATCTCTTATATATAATTTGGCACAAATAACTCCGTTATCATGTGGATTCTCAAATGGGATTCAGGTCCTTAATTTAACCGATGGTGGTATGGATAATAGCCAGTTGCTCTGTATTGATTTGCAGCCAAATGAATTATGGAGTACAGCTTTCGAAGATTCAACTCATTTGGAAAAAATTGAAACAAAATGGAGCGGCATTTTAGCAAGAATAAAGAATATAATAATCAAGAAAGCATCTGATGAAAATTTGGAAACTGCAAACACTTTGCTCAGAGCTTGCTATAACTTTTACCGAGAGAGTTCTTCTGTTGTGCTTACCTCTGGTCTCAACTTTTATTTGATTCCATCTCAATTAGTAACAGAGACACTGCTTAACCCACCCTCAACTGGGATTGAGCCACTTGATCTGAGCATACCAAGGAAGCTTCTATTGTGGGCCTATGTGCTATTGCATGGACGTTGTGCGAATATCTCTGTTGTTGTAAAGCACTGTGAAGAAATTTCAAAGTCAAAGGTGAAAAGAGGAAGTGGAATGTCACCTGCGTTTTCAAACACGCCTGCCCCTAGTCTTCCAGGTAGTGGTAAAAACGGACCAACTTCTGCCGGAGGCATTGACGTTGATTCTAGCAGCAATACCACTAATCTTTTAAATTCCTCCGATGAGATTCAGAAGAATCTCTTTGCTTCTCCCCACTTGCACCAATGTACCACTAACGATGCAGAAAGAAGCAATTTGATAACACATGAAGTAGATATAGAGGGAGATTGA 5748 0.3902 MFSIAAINDTDSKSQWEPLAPTKEAQEFHLSQTYHEGLLKLQAKEYEKARELLESVLKDPLIANAQVDRSASDGHLLQLRFLALKNLAAVFLQQGSTHYENALHCYLQAVEIDSKDSVVWNQLGTLSCSMGSLSISRWAFEQGLLCSPNNWNCMEKLLEVLIAIGDEVACLSVAELILRHWPSHSRALHVRNTIEESEPLPFAPRGIDKLEPKHMRLKFPDKRKATNEKVDEDVAFKKLKQNKELHLTEASWVALTDALLEILSPQSSEINPEKACCSPDIMLNINLPSSSEAVMNTMEMKGSSGESSAFSDGSIERSSNFKEKEANIQEEQPHERRSSRLERLRSRKPGKEESDSSCGKDRAKVVIQYLEPFIAGGLGGRGTIHRDTTTLSCLGNSEYNNVSAFLKETSNNYGAYHMAHLLLEEVARQGLTYQDALVKFLELEKLTRHWGKERTAECNIFLAELYYDFGSCSPNGSKQLEFISETSYHLCKIIESVALDYPFHLTHALNKGCFLIDSIQETSGTTIDTATESNYSNLDSSFLRKNRSFWARFFWLSGRLSIFDGNRAKACEEFCIALSLLAKSENMEDSLCSVPRQHCKAVKELNIDRVLYEINILKVNFLMEKSIIKMMEEGNFLECVSLLSPLLFSTQDVYPDSFSSSMAEKKDEKRSSIELRALDVLIEACQKARPMDVEMYFNCHYRKLKILMAMMGLNKCITSFKYSDQTLGLSASPNFDTDSKESSSKHCSHLVAEEVKALSDCISQVKKVIDHRGDSDGLAVPSSSICQMHSLLLLIMSYVASIVVCNKASAQEISDQAESICFIDASIVFCKLQHLDPTTPIKTQVDLIVAMHDLLAEYGLCCVGEGGKGEERTFLRFAIKHLLALDMKLKSSFNHKESMRCEEVSKNSLVNVSVEESKSDMLDIRMDWTKIDEISSVKKDGESSSSQLIECGNELSEEEREELESKIDNALDQCFFCLYGLNLRSDSSYEDDLVMHKNTSRGDYQSKEQCADVFKYVLPYAKASSRTGLVKLRRVLRAIRKHFLQPPEDLLAGNPIDKFLDDPNLCEDKLSEEAGSDGFLETITKIMFPDVGGLAQYNATLLKRSEPYLEVYCNLYYFLALSEEMSATDKWPGFVLTKEGEEFVEQNAKLFKYDLMYNPLRFESWQRLGNIYDEEVDLLLNDGSKHINVVGWRKTTTLSERVETSRRRSRRCLLMSLALAKTSTQQCEIHELLALVYYDSLQNVVPFYDQRSVLPLKDAAWMMFCENSMKHFKKAFTLKQDWLHAFYLGKLSEKLGYSHEIALSYYNKAIALNISAVDPVYRMHASRLKLLFKCGKQNLEILKVLSANSFNQSLKEAVTSILGDLGCLSFNTKEICTHANFVETKHEELLKLDKVWSMIYNDCLSALETCVEGDLKHFHKARYMLAQGLYKRGENGDIERAKDHLSFCFKSSRSSFTINMWEIDSMVKKGRRKAPGSACNKKALEVNLPESSRKFITCIRKYVLFYLKLLEETGDRCILERAYVSLRGDKRFSLCIEDLVPVAIGRYLKALISTMCHCQTTASGSVSCSDNMLEKMFALFMEQGSLWPEICSLHEIEGPNMSENIIYGYLHEYIVLLEKIGKLETLEAINEKIRKRFKNPKFSNSNCGKVCRHASVAWCRSLIYNLAQITPLSCGFSNGIQVLNLTDGGMDNSQLLCIDLQPNELWSTAFEDSTHLEKIETKWSGILARIKNIIIKKASDENLETANTLLRACYNFYRESSSVVLTSGLNFYLIPSQLVTETLLNPPSTGIEPLDLSIPRKLLLWAYVLLHGRCANISVVVKHCEEISKSKVKRGSGMSPAFSNTPAPSLPGSGKNGPTSAGGIDVDSSSNTTNLLNSSDEIQKNLFASPHLHQCTTNDAERSNLITHEVDIEGD* 1916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1072 1915 Gene3D Tetratricopeptide repeat domain 6 194 IPR011990 GO:0005515
Apr5g1072 1915 Coils Coil 39 59 - -
Apr5g1072 1915 MobiDBLite consensus disorder prediction 317 359 - -
Apr5g1072 1915 SUPERFAMILY TPR-like 33 169 IPR011990 GO:0005515
Apr5g1072 1915 MobiDBLite consensus disorder prediction 300 359 - -
Apr5g1072 1915 Coils Coil 953 973 - -
Apr5g1072 1915 PANTHER CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED 1 1884 IPR033053 -
Apr5g1072 1915 MobiDBLite consensus disorder prediction 1837 1875 - -
Apr5g1072 1915 MobiDBLite consensus disorder prediction 300 316 - -
Apr5g1072 1915 MobiDBLite consensus disorder prediction 1834 1875 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1072 K17613 - gmx:100783547 3261.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1072 5 15384604 15398717 Apr5g1072 5 15384604 15398717 ECH