Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1069 ATGGGCATCACTCAAATGTGTTTCTGCTGCCACAAATATAGACAAACCATCATATGGCTCATTCTCTTTGCTTCAACTTTGACCAATATTGTTTTCATGGCTGAAGGAAGAGCAATTTCTAATCTTATTGAAGTTACCAAGAAGGACATGAAAGATGGGGAATCAATCATGGTTGCAAAAGCTCAGATAGGGTCAAGGCCTCCTAAGTGTGAAAAGAGATGCAGAAATTGTGGACATTGTGAAGCAGTTCAAGTTCCGGTTGTCCCTCAAATTCAAAGTCATAGAAGGCATTTTCCCACAGCAAGAGGAACCGTAGTTGTTACTTATTCAAGAGGTGATGACCTTTCCAATTACAAACCAATGAGTTGGAAATGCAAGTGTGGGGACTACTATTTCAATCCATGA 405 0.4 MGITQMCFCCHKYRQTIIWLILFASTLTNIVFMAEGRAISNLIEVTKKDMKDGESIMVAKAQIGSRPPKCEKRCRNCGHCEAVQVPVVPQIQSHRRHFPTARGTVVVTYSRGDDLSNYKPMSWKCKCGDYYFNP* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1069 134 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 1 134 IPR039455 GO:0010374
Apr5g1069 134 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2 1 134 - -
Apr5g1069 134 Pfam Epidermal patterning factor proteins 62 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1069 Apr-Chr5 15352149 15352931 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1069 - - pvu:PHAVU_009G113100g 183.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1069 5 15352149 15352931 Apr5g1069 5 15352149 15352931 ECH