Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1062 ATGAACCCTGATCAGTTTCAGAAGAATAGCATGTACATAGAAAACCCTGAAGCATTTAGCGAAGGTGGCAAAAACTTTGACGATGATGGACGAATCAAAAGAACCGGTACATGGGTGACTGCGAGTGCTCATATCATAACGGCAGTGATAGGGTCTGGAGTGTTGTCACTTGCATGGGCAATTGCACAAATGGGTTGGGTGGCTGGTCCTGCGGTTCTTATTGCCTTCTCTTTTATTACATACTTCACTTCCACTCTTCTTGCAGACTGTTATCGTTCACCTGACCCTGTTCATGGCAAACGAAACTACACCTATTCCGATGTTGTCAGATCTGTCTTAGGAGGAAGGAAATTTCAGCTGTGTGGATTAGCTCAGTATATAAATCTAGTCGGTGTAACTATCGGTTACACAATAACAGCTTCAATTAGTATGGTGGCGGTGAAGAGGTCGAATTGTTTTCACAAACATGGCCATCATGTTAAGTGCTATACGTCAAATAACCCTTTCATGATCCTCTTTGCCTGCATCCAAATTGTGCTTAGCCAGATACCAAACTTTCATAAGCTCTCGTGGCTCTCCATTGTTGCAGCCGTTATGTCTTTTGCTTATTCTTCCATTGGTCTCGGCCTCTCCATAGCTAAAGTAGCAGGTAATTTTGCAATCAAATTAACGACATCCTTAACGGGGGTGCAAGTTGGGGTAGACGTCACAGGAACTGAGAAGGTCTGGAGGATGTTTCAAGCTATTGGTGACATTGCCTTCGCTTACGCTTATTCTAATGTGCTCATCGAGATACAGGATACCCTAAAATCGAGTCCTCCAGAGAACAAGGTCATGAAAAGAGCAAGTTTGATTGGCATCTTGACTACAACCATGTTTTATGTGCTATGTGGCTGCGTAGGTTATGCAGCATTTGGAAATGATGCACCAGGAAATTTCCTCACAGGGTTCGGCTTCTATGAGCCTTTTTGGCTAATAGACTTTGCCAACGTCTGTATAGCTGTGCACTTAATTGGCGCATACCAGGTCTTCTGCCAACCTATATTTGCGTTTGTAGAGAACTGCAGCAAGGAAAGATGGTCCAACAGCCAATTTGTAAATGGAGACCATGCTGTGAACTTTCCACTATGTGGAACCTACCATGTTAACTTCTTCAGGGTAATCTGGAGAACAACATATGTCATCATCACAGCTGTGATAGCTATGATGTTTCCATTCTTCAATGACTTCTTGGGCCTAATTGGTTCCCTGTCCTTTTGGCCATTAACAGTTTACTTCCCCATTGAAATGTACATAAAGCAGTCAAAGATGCAAAGACTTTCCTTCACGTGGACATGGCTCAAGATATTGAGCTGGGCCTGCTTAATTGTTTCTATTATCTCTGCTGCTGGCTCCATCCAAGGCCTCGCTCAAGATCTCAAGAAATACCAGCCCTTCAAACCCCAGCAATAA 1452 0.4346 MNPDQFQKNSMYIENPEAFSEGGKNFDDDGRIKRTGTWVTASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLIAFSFITYFTSTLLADCYRSPDPVHGKRNYTYSDVVRSVLGGRKFQLCGLAQYINLVGVTIGYTITASISMVAVKRSNCFHKHGHHVKCYTSNNPFMILFACIQIVLSQIPNFHKLSWLSIVAAVMSFAYSSIGLGLSIAKVAGNFAIKLTTSLTGVQVGVDVTGTEKVWRMFQAIGDIAFAYAYSNVLIEIQDTLKSSPPENKVMKRASLIGILTTTMFYVLCGCVGYAAFGNDAPGNFLTGFGFYEPFWLIDFANVCIAVHLIGAYQVFCQPIFAFVENCSKERWSNSQFVNGDHAVNFPLCGTYHVNFFRVIWRTTYVIITAVIAMMFPFFNDFLGLIGSLSFWPLTVYFPIEMYIKQSKMQRLSFTWTWLKILSWACLIVSIISAAGSIQGLAQDLKKYQPFKPQQ* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1062 483 Pfam Transmembrane amino acid transporter protein 34 469 IPR013057 -
Apr5g1062 483 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 14 476 - -
Apr5g1062 483 PANTHER OS05G0424000 PROTEIN-RELATED 14 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1062 Apr-Chr5 15293174 15298514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1062 7 480 Organic Solute Cotransporters AT5G49630 75.523 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1062 K24917 - gmx:100777963 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1062 5 15293174 15298514 Apr5g1062 5 15293174 15298514 ECH