Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1054 ATGAAGTTGCAAGTTACTATCTGCATAGTCACATCACATGATGAAAAACAAATCATGCCAGTTTATGATCAGCATGCCTTTGATAATAACCATTTGTCTTTTTCTTTTGTTTTGTTTTGCTGCATTCAGTTCTTAGCAGAAATGAAGGCCATAGGGAAGATATCAGGGCCAACAGCCATCACGGGTTTACTCTTATATTCTAGAGCCATGATCTCCATGCTTTTCCTTGGCTACCTCGGTGAGATGGAACTAGCAGGTGGCTCTCTCTCCATCGGTTTTGCCAACATCACCGGTTACTCTGTGATCTCTGGATTAGCCATGGGAATGGAACCCATTTGTGGACAAGCCTATGGAGCAAAACAATGGAAGATACTAGGCTTGACCCTCCAAAGAACCGTCCTTCTCCTCCTCTGCACGTCCATTCCCATCTCATTTCTATGGCTCAACATGAAGAGTATCCTCTTGTGGTGTGGCCAAGACCAAGAGATATCATCAGTGGCACAAACTTTCATTCTCTTCTCCATCCCTGACCTCTTCTTCCTCTCACTCCTCCACCCTCTACGCATCTACCTAAGGACTCAAACAATCACATTGCCACTCACATATTGCTCAGCCATATCTGTTCTCCTCCATGTGCCTCTCAATTTCCTCCTAGTCGTTCACTTCAAAATGGGCATAGCAGGGGTAGCCACAGCAATGGTTTGGACCAACCTCAACCTCTTCCTCTTCCTCTTTTCCTTTGTTTATTTCTCGGGTGTGTACAAGGACTCGTGGGTTTCTCCGAGCATGGACTGTTTAAAGGGTTGGTCTTCTTTACTTGCACTTGCGGTTCCAACCTGTGTTTCGGTTTGTCTAGAGTGGTGGTGGTACGAGCTCATGATAATTCTGTGTGGACTTTTGGTCAACCCGAAAGCGACCATTGCTTCAATGGGAATCCTTATCCAAACAACATCTTTGGTCTATGTGTTCCCATCATCTCTCAGCCTCGGTGTGTCCACGAGAGTGGGAAATGAGTTAGGTGCAAACAACCCCTCCAAAGCTCGCATTTCCATGATAGTGTCACTCTTTTGTGCTGTCGCTTTAGGCATCTCAGCCATGCTTTTCACCACCTTAATGAGGCACCAATGGGGCAGGTTCTTCACCACTGGCCAAGAGATTCTTAACCTCACTGCCATAGCTTTGCCAATTGTTGGCCTTTGTGAGCTCGGAAACTGCCCTCAAACCACTGGTTGTGGAGTTCTTAGGGGCAGTGCTAGACCCACCATTGGTGCAAATATCAACTTGGGCTCCTTTTATTTGGTGGGTATGCCCGTCGCTGTTCTTCTTGGATTTGTCGCCAAATTGGGGTTTGCCGGGCTTTGGCTTGGGTTGCTTGCAGCCCAAGCCTCTTGTGCTTCTCTCATGTTATTTGTTCTCTCAACCACTGATTGGAATGCTCAGGTACAAAGAGCAAAGGAACTCACTAAAACTTCTATTACTAGTGCTAGTGCTGCTTCTACCATGTTACCCACATTCACTCAAACAGAATGCAACAACAATCATCATCATGCTTGTCTTCAGGAGATTGTAGTCACGGATGAGGAGCTTACCAAGACAACCTCCCTTGAAACCGACCCTCTCATCGTACCCACCGCCAAACACAATATAAATTAA 1653 0.4616 MKLQVTICIVTSHDEKQIMPVYDQHAFDNNHLSFSFVLFCCIQFLAEMKAIGKISGPTAITGLLLYSRAMISMLFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKILGLTLQRTVLLLLCTSIPISFLWLNMKSILLWCGQDQEISSVAQTFILFSIPDLFFLSLLHPLRIYLRTQTITLPLTYCSAISVLLHVPLNFLLVVHFKMGIAGVATAMVWTNLNLFLFLFSFVYFSGVYKDSWVSPSMDCLKGWSSLLALAVPTCVSVCLEWWWYELMIILCGLLVNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANNPSKARISMIVSLFCAVALGISAMLFTTLMRHQWGRFFTTGQEILNLTAIALPIVGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAVLLGFVAKLGFAGLWLGLLAAQASCASLMLFVLSTTDWNAQVQRAKELTKTSITSASAASTMLPTFTQTECNNNHHHACLQEIVVTDEELTKTTSLETDPLIVPTAKHNIN* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1054 550 PANTHER PROTEIN DETOXIFICATION 33 501 - -
Apr5g1054 550 CDD MATE_eukaryotic 47 483 IPR045069 GO:0042910|GO:1990961
Apr5g1054 550 PANTHER MULTIDRUG RESISTANCE PROTEIN 33 501 - -
Apr5g1054 550 Pfam MatE 57 217 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr5g1054 550 Pfam MatE 278 441 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr5g1054 550 TIGRFAM matE: MATE efflux family protein 63 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1054 Apr-Chr5 15191628 15194671 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1054 K03327 - gmx:100783792 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1054 5 15191628 15194671 Apr5g1054 5 15191628 15194671 ECH