Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1052 ATGGCCGCTCCTACGAGGGACAGGGACCAAGCCCTCTCTCTCCTCGCCGCTGCCAACAACCACGGCGACCTCTCCGTCAAAACCTCTTCCTTGAAACAAGCCAAAGACCTTCTTCTATCCACCGACCCCTCTCTAGCCGCCGAACTCTTCCCTTACTTGCTCGAGCTTCAGTCTTCCCCCGAAAGCCTCGTTCGCAAATTGCTCATCCAGATAATTGAGGAGATTGGTTTTAGAGCTGTTGAGCACTCTCCTAAGCTGATATCTGTACTATTAACATTTTTACGAGACAGCGATGTAATGGTTATAAAACAGTCTATTGTTAGCGGTACAAATATCTTCCGTAGTGTTTTAGAGGAGATGATTGTGCAGTTTCAACAATATGGTAAAGTTGAGAGGTGGCTAGAAGATATTTGGATGTGGATGCTTAAGTTCAAGGATGCTGTTTTTGGGATTGCTCTGGAGCCTGGTTCTGTTGGAATAAAGTTGCTGGCACTGAAATTCTTGGAAACGGTTGTATTAATTTTTACATCTGACATCAGTGATACTGATAAATCAGCTACAGAAGGCGTTAGGCAAGCTGTTAATGTCTCATGGTTAGTGGGTGGTCACCCCCATCCTGTTCTTGATCCGGTGTTGCTTATGTCAGAGGCAAATAGGACTATTGGCATTCTATTAAATTTATTGCAGTCTGCTGGCAGTCTTCCTGGTTGCTTGACAATTACCGTTGTAAATTGTTTAGCAGCCATTGCAAGGAAAAGGCCACAGCACTATGATAATATTCTTTCAGCATTGCTTGATTTTGATCCAAATTTTCAAACTGTGAAAGGATGCCATGTTGCTAGCATTCAGTACTCCTTAAGAACAGCTTTTTTGGGTTTTCTAAGGTGCACTTATTCACCAATATTAGAGTCAAGAGAAAGACTAATAAGGAGCCTGCGGGCTATGAATGCGGGTGATGCTGCTGATCAGGTCATTCGACAAGTTGACAAAATGATTAAAAATGGTGATCGTTCTACCCGTGATACACGAGTTAGCAAGGATGATCAACCATCAAGTCAGTCACCTGTTTCAGGGGAATTATCTAGAAAAAGACACGCTCCTCCAGATAATGAACAATTGGCCAATGGTCATGAAGCCATCTCAAAGCGAATACGTACTGGTCCTGACTCTCACTCTACTTTACCAGCTCAAATCAATGATTCCGGGCAGGATCTTAACCCTGTTAATGGAGTATCATCTAATGCTCCTCTGCTGGATAGTGAACTAACTGCTGTAGAGCAAATGATTGCTGTGATTGGTGCTTTACTTGCTGAAGGAGAGAGAGGTGCCGAATCTCTTGAAATCCTCATTTCAAAGATTCATCCTGATCTGTTGGCTGATATTGTCATAACTAATATGAAGCACTTGCCTAAGACCCCCCCACCACTAGCAAGGCTTGGGAATTTACCAGTAACACAAGTGAGCTCCCAAGTCAGTCAATCACAGGTTATAGCAGCTTCTGTTCCAATAAACTCTGTCACTGCCCAAGCATCATTCCCTTCAACTACAGCCACTGCTATTGCCACTACTTCATCGCCATCTGACACATCTAACTTCAGTAACCTGCCTGCAGATTCTAAACGTGATCCACGCCGGGATCCCCGGCGCCTGGATCCACGGCGTGTTGTGGTAACTCCTGGAGGAGCAACTGTATCAATTGCAGATGATACTGGGGTCACAAAATTAGAGTTTGATGAGCATGTGTCTTCTATTAAGCCTGTTTCACATCCTGTTGTGACTGCTAATGACAATACTCCATCAGATCTAACAGTCAAAATAAAAAATGATGATATGATCTCTGAAGGACCCTCGGTTTCTGAACCTGATCGGGCATCACCCAAAACAGAGATCTTGGAAAGACCTGGAGATGTTCATCGGATTACAGAAGCTAATTCTTTGGATCTCTCACTCTCTTCCACTGAATTAAAAGATGAGGATTTGAGTACAGTGAAGCTGTCGGATGATACTGAAACAGTTGGGACAGATTCATCATCTATTGTAGAGTTTGATCAATTTTCTCATGATGTTCAAGTTGCATCTACATCAGAAGATACCTGTCTGGAGTTACCAGAGCTTCCACCTTATGTTGAACTATCTACAGAACAGGAAAATAAAGTGAAAAATGTGGCTATTCGGCATATAATTGATTCTTACAAACATTTGCATGGGACAGATTGTCAGCAGTTTTGCATGCCACTACTTGCCCGACTAGTTGCTCAGATTGATAATGACAACGAGTTTAATATGATGCTGGAAAAACACATCCTAGAAGATCACTGGCGAAAGGGGCATGAACTTGTACTACATGTTTTGTACCATCTTCACTCTCGCATGATATTGGATTCAGTTGGAAACACTTCATCTTCTGCTGTTTTGTATGAAAAATTTCTCTTGGGAGTGGCCAAAACTTTGTTGGATTCTTTTCCAGCTTCAGACAAGTCTTTTAGTAGACTTCTTGGTGAAGTCCCACTTTTGCCCGAATCGACCTTGAAGATTTTGAGTGATCTTTGCTATTCTGATATTGTTGGTCATGATGGGAAAATTATCCGTGACATTGAACGAGTAACTCAAGGTCTTGGTGCCATCTGGAGTTTAATTTTGGGGCGTCCACAAAATCGCCAAGCCTGCTTAGGAATAGCATTGAAGTGTGCTATTCACCCACAGGATGAGATTCGTGCAAAAGCTATTCGGCTGGTTACAAACAAGCTCTTTCAGCTTAGTTACATATCAGAAGATGTTGAGAAATTTGCAACAGAAATGCTTCTTTCTGCTGTAGATCATGAAGTTTCAGATACAGGTTTTATGCAGTCTGGACCTACTGAAGAAAGAGCCAAGGCAGAGGTTTTAGAGTCCACAATTTCTGAAAATGACTCTGCTAGAGTTGCTAAACCAATGATTCAAAGTGTTCCATCTATATCTTTTTCTGAAGCTCAACGCCTCATTTCTTTGTTTTTTGCTTTATGTACAAAGAAACCCAGTCTTCTTCAGATTGTATTTAATGTATATGGGCAAGCCCCGAGAACTGTAAAACAGGCTTTTCATCGCCACATTCCTATTGTTGTGAGGGCATTAGGGCAATCTTATTCTGAATTGCTCCGTATCATATCTGATCCACCACAAGGAAGTGAAAATCTTCTGACACTGGTGGTGCAAATATTGACTCAAGACACAACGCCATCTTCTGATTTGATATCTACAGTTAAATGTTTATATGAAACTAAATTTAAAGATGTTACAATACTTGTTCCGTTACTGTCATCACTTTCCAAAAAAGAGGTTTTACCAATATTCCCTCGGCTTGTTGATCTTCCATTGGAAAAGTTTCAAAGGGCACTAGCTCACATACTACAGGGTTCAGCTCATACAGGTCCAGCTTTAACACCTGTGGAAGTGTTGGTTGCAATCCATGGAATTGTTCCTGAGAAAGATGGCCTGGCACTTAAGAAGATAACAGATGCCTGCTCGGCTTGTTTTGAGCAACGTACAGTGTTCACACAACAGGTTCTGGCAAAGGCACTGAACCAGATGGTTGATCAAAGCCCGCTGCCTCTACTTTTCATGAGAACAGTTATTCAGGCAATTGATGCTTTTCCTGCGCTGGTTGATTTTGTTATGGAGATACTCTCAAAACTTGTGACTAAACAGGTGTGGCGTATGCCCAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAGACACAGCCACGATCTTTTCAAGTATTATTGCAGTTGCCACCTCAACAACTGGAAAGTGCACTCAATAGGCATGCCAATCTCAGAGGTCCCCTTGCTTCTTATGCCAGCCAACCAACTGTAAAATCTTCACTTAGTAGGTCAACTTTAGCAGTCCTTGGTCTTGCAAATGATGCTCATGTGCAGCAACATTTGTCTACTTCGTTACACCCTTCTGACACAAGTTCTTCAGTTCACGGAGCAACTCTGACGTGA 3987 0.4219 MAAPTRDRDQALSLLAAANNHGDLSVKTSSLKQAKDLLLSTDPSLAAELFPYLLELQSSPESLVRKLLIQIIEEIGFRAVEHSPKLISVLLTFLRDSDVMVIKQSIVSGTNIFRSVLEEMIVQFQQYGKVERWLEDIWMWMLKFKDAVFGIALEPGSVGIKLLALKFLETVVLIFTSDISDTDKSATEGVRQAVNVSWLVGGHPHPVLDPVLLMSEANRTIGILLNLLQSAGSLPGCLTITVVNCLAAIARKRPQHYDNILSALLDFDPNFQTVKGCHVASIQYSLRTAFLGFLRCTYSPILESRERLIRSLRAMNAGDAADQVIRQVDKMIKNGDRSTRDTRVSKDDQPSSQSPVSGELSRKRHAPPDNEQLANGHEAISKRIRTGPDSHSTLPAQINDSGQDLNPVNGVSSNAPLLDSELTAVEQMIAVIGALLAEGERGAESLEILISKIHPDLLADIVITNMKHLPKTPPPLARLGNLPVTQVSSQVSQSQVIAASVPINSVTAQASFPSTTATAIATTSSPSDTSNFSNLPADSKRDPRRDPRRLDPRRVVVTPGGATVSIADDTGVTKLEFDEHVSSIKPVSHPVVTANDNTPSDLTVKIKNDDMISEGPSVSEPDRASPKTEILERPGDVHRITEANSLDLSLSSTELKDEDLSTVKLSDDTETVGTDSSSIVEFDQFSHDVQVASTSEDTCLELPELPPYVELSTEQENKVKNVAIRHIIDSYKHLHGTDCQQFCMPLLARLVAQIDNDNEFNMMLEKHILEDHWRKGHELVLHVLYHLHSRMILDSVGNTSSSAVLYEKFLLGVAKTLLDSFPASDKSFSRLLGEVPLLPESTLKILSDLCYSDIVGHDGKIIRDIERVTQGLGAIWSLILGRPQNRQACLGIALKCAIHPQDEIRAKAIRLVTNKLFQLSYISEDVEKFATEMLLSAVDHEVSDTGFMQSGPTEERAKAEVLESTISENDSARVAKPMIQSVPSISFSEAQRLISLFFALCTKKPSLLQIVFNVYGQAPRTVKQAFHRHIPIVVRALGQSYSELLRIISDPPQGSENLLTLVVQILTQDTTPSSDLISTVKCLYETKFKDVTILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQSPLPLLFMRTVIQAIDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQTQPRSFQVLLQLPPQQLESALNRHANLRGPLASYASQPTVKSSLSRSTLAVLGLANDAHVQQHLSTSLHPSDTSSSVHGATLT* 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1052 1328 MobiDBLite consensus disorder prediction 520 537 - -
Apr5g1052 1328 MobiDBLite consensus disorder prediction 331 412 - -
Apr5g1052 1328 MobiDBLite consensus disorder prediction 386 412 - -
Apr5g1052 1328 MobiDBLite consensus disorder prediction 520 555 - -
Apr5g1052 1328 Pfam Symplekin/PTA1 N-terminal 98 323 IPR032460 -
Apr5g1052 1328 SUPERFAMILY ARM repeat 9 919 IPR016024 -
Apr5g1052 1328 MobiDBLite consensus disorder prediction 331 347 - -
Apr5g1052 1328 MobiDBLite consensus disorder prediction 1308 1328 - -
Apr5g1052 1328 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1304 - -
Apr5g1052 1328 MobiDBLite consensus disorder prediction 362 385 - -
Apr5g1052 1328 MobiDBLite consensus disorder prediction 538 553 - -
Apr5g1052 1328 Pfam Symplekin tight junction protein C terminal 1090 1268 IPR022075 -
Apr5g1052 1328 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1304 - -
Apr5g1052 1328 Gene3D - 2 347 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1052 Apr-Chr5 15140037 15165057 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1052 K06100 - gmx:100789876 2183.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1052 5 15140037 15165057 Apr5g1052 5 15140037 15165057 ECH