Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1045 ATGCTCATTTCGCATGACCCTATTTTGTTGAATTCCGCTTTTGTCCCCACTCCCATTTCAGAACATCGCCAACGTTCTCATTTTCTTTGCTTCTCTTCTCGCTCAGATATGGATACTGCTGCAACTCAAAGTCTTTACCCTTTGCACCGGTGTAAAACTCTTCACCTGGTTAGACATGCCCAAGGATTTCACAATGTAGAAGGAGAGAAAAACCCTGAAGCGTACTTGTCCTATGATCTTTTTGATGCAAACCTGACCCCTCTTGGCTGGAAGCAGGTTGATAATCTGAGAGCACATGTTAAGGCAAGTGGTCTTTCCAAAAGAATTGAACTAGTTATTACTTCCCCCTTGTTAAGGACCATGCAAACAGCAGTTGGAGTGTTTGGTGGTGAAGAATACACCGATGGGATTGATGTACTTCCTCTGATGTATGACAATGTGGGAGATAGTGGTCGTGGTGCAATATCTAGTCTGAATTCCCCACCATTTATAGCAGTAGAGCTTTGCCGAGAACATTTGGGAGTTCATCCTTGTGATAAGAGAAGCAGCATCACAGAGTACCAGCATATGTTTCCAGCAATTGATTTTTCACTGATAGAAAATGATGAGGACATTTTGTGGAAACCTGACAATAGAGAGAAGAATGAAGAAGTTGCTGCCAGGGGACTGAAATTTTTGGAATGGTTGTGGACACGTAAAGAAAAGGAGATAGCTGTTGTTACCCACAGCGGTTTTCTGTTTCATGCCCTAAGTGCTTTTGGAAATGATTGCCATCCAACAGTGAAGAATGAAATCTGTACACACTTTGCTAATTGTGAGCTACGTTCAGTGGTTATCGTTGATAGACGTATGATAGGTTCAGATGAGTCCTCTACCAACTATCCTGGCAAAATTCCATATGGCCTTGACCTTCCCAGTGATGCTGTTGACGGGAAACATCCTGAGAATGGGGAGGCGAAATGA 963 0.4299 MLISHDPILLNSAFVPTPISEHRQRSHFLCFSSRSDMDTAATQSLYPLHRCKTLHLVRHAQGFHNVEGEKNPEAYLSYDLFDANLTPLGWKQVDNLRAHVKASGLSKRIELVITSPLLRTMQTAVGVFGGEEYTDGIDVLPLMYDNVGDSGRGAISSLNSPPFIAVELCREHLGVHPCDKRSSITEYQHMFPAIDFSLIENDEDILWKPDNREKNEEVAARGLKFLEWLWTRKEKEIAVVTHSGFLFHALSAFGNDCHPTVKNEICTHFANCELRSVVIVDRRMIGSDESSTNYPGKIPYGLDLPSDAVDGKHPENGEAK* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1045 320 SUPERFAMILY Phosphoglycerate mutase-like 52 282 IPR029033 -
Apr5g1045 320 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 25 310 - -
Apr5g1045 320 Pfam Histidine phosphatase superfamily (branch 1) 54 126 IPR013078 -
Apr5g1045 320 MobiDBLite consensus disorder prediction 295 320 - -
Apr5g1045 320 SMART PGAM_5 53 249 IPR013078 -
Apr5g1045 320 Gene3D - 51 297 IPR029033 -
Apr5g1045 320 CDD HP_PGM_like 53 124 IPR013078 -
Apr5g1045 320 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 25 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1045 Apr-Chr5 15041682 15047439 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1045 - - gmx:548047 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1045 5 15041682 15047439 Apr5g1045 5 15041682 15047439 ECH