Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1040 ATGGACGACACCGTTTCACCGATCGAGGAAGTTCGGTTGATCGTATCGAACGAAGATGATCCGACCTTGCCGGTTTGGACTTTCCGTATGTGGTTTTTGGGACTGGTCTCGGTGGTGCTCCTCTCGTTTTTGAACACATTTTTTGGGTACAGAAAGGAACCTCTGTTGGTGACGATGATATCGATTCAGGTTGCGACGCTTCCCATTGGACGGTTCATGGCGAAAGTGCTTCCAAAATGGAAGTTTCGAATCGGTAAAAAAGAGCTAACGCTGAATCCAGGGCCATTCAACATGAAAGAGCACGTGTTAATTTCTATATTCGCAAACGCTGGTGCTGCATTTGGGAACGGTTCGGCATACGCGTTGAGTATTGTGGATATAATTCGAGCGTTTTATGGTAGAAAAATTAGTTTCTTGGCTAGTTGGCTTCTTGTAATGACGACGCAGGTGTTGGGGTATGGATGGGCGGGGATTATGAAGAAGTACGTGGTGGAGCCCGCACAGATGTGGTGGCCTGCTACTCTCGTCCAAGTCTCTCTGTTCAGGGCATTGCATGAAAAAGAACGGAGGCGCATGTCGAAAGAGAAATTCTTCTTGATAGCGCTTATTTGCAGCTTCGCATGGTACGTGGTTCCTGGTTACCTCTTCACAACGTTGTCAATTATTTCGTGGGTGTGTTGGATTTTTCCTCATTCAATCACAGCCCATCAAATAGGATCAGGCAAGTATGGACTTGGTTTGGGTTCTTTTTCCCTTGATTGGACCACTGTAGCCGCATTCCTTGGCAACCCTCTTGTTACTCCTTTCTTTGCAATAGCTAATATCATTGTGGGATACGTCTTATTAATCTACCTTCTCATACCTCTATCATATTGGGGATTTAATCTCTATGATGCCAAAAACTTCCCCATATACTCTTCAACTCTATTCACTGCCCATGGTAAAAAATACAATGTGACAGCCATTGTAAATGAAAAGTTCGAGATAGATATGAATGCATACGAGCAACAAGGTCGAGTCAACATGAGTGTGTTTTTTGCTGTTAGCTATGGACTCGGCTTTGCTGCCATTGCCTCTTCCCTCACTCATGTGGCCATATTTAATGGAAGGGAGATATGTAGACAATTCCGATCTTCCCGATCTGGAACGGAAGATATTCACACAAGATTGATGAAGAAGTACAAGCAAATACCTAATTGGTGGTTTCATGTGACGCTTTTGGCTTCATTTGTACTTGCACTTGTGCTCTGTATTGCCATGAAAGATCAGATACAAATGCCATGGTGGGGTCTCATATTTGCAGCTGGGCTTGCAGCAACTTTTACTCTTCCCATTAGCATCATAACGGCCACGACTAATCAGAGTCCAGGTTTGAATATCCTTACCGAGTATATCATAGGTGTGATTTTACCTGGTAAACCAATCGCCAACGTTTGCTTCAAGACATATGGTTACATGAGTATGTCACAGGCTGTTTCCTTTCTATCTGATTTCAAGCTAGGACATTACATGAAGGTTCCACCACGTTCAATGTTCATAGTTCAGATTGTAGGGACTCTTGTAGCTGGAACCGTGGACGTTGGCGTGGCATGGTGGTTGCTGGGTACAATCAAGAATATATGCAACGAAGATAAACTGCCTGCTGATAGCCCGTGGACTTGCCCGAGTGACCAAGTCTTCTTTGATGCATCCGTGATATGGGGTTTGGTTGGTCCAAAACGAATATTTGGTACTCTTGGAAATTACTCAAAACTCAATTGGTTCTTTTTAATTGGAGCATTGGGACCACTGGTTATATGGCTACTCCATAAAGCATTTCCCAAACAAAAATGGATATCCATGATTCACCTTCCTGTACTTCTAGGAGCAACAGCGAACATGCCACCCGCTAGCACAGTAAACTTCAATGCATGGATCATTGTTGGGACAATCTTTAACTACTTTATATTTAAATATCGTAAGGAATGGTGGCAGCGATACAATTATGTGCTAGCAGCAGCTATGGACGCTGGATTGGCTTTCATGACAATTCTACTGTATTTTGCTATTAACATGGAGGAAAAAAGCATCGACTGGTGGGGACAAGATGAACACTGTGAACTTGCTAGATGTCCAACAAGCAAAGGTATTGTTGGTGAGTGGTGTCCTGTAAATACTGGTTGA 2163 0.4346 MDDTVSPIEEVRLIVSNEDDPTLPVWTFRMWFLGLVSVVLLSFLNTFFGYRKEPLLVTMISIQVATLPIGRFMAKVLPKWKFRIGKKELTLNPGPFNMKEHVLISIFANAGAAFGNGSAYALSIVDIIRAFYGRKISFLASWLLVMTTQVLGYGWAGIMKKYVVEPAQMWWPATLVQVSLFRALHEKERRRMSKEKFFLIALICSFAWYVVPGYLFTTLSIISWVCWIFPHSITAHQIGSGKYGLGLGSFSLDWTTVAAFLGNPLVTPFFAIANIIVGYVLLIYLLIPLSYWGFNLYDAKNFPIYSSTLFTAHGKKYNVTAIVNEKFEIDMNAYEQQGRVNMSVFFAVSYGLGFAAIASSLTHVAIFNGREICRQFRSSRSGTEDIHTRLMKKYKQIPNWWFHVTLLASFVLALVLCIAMKDQIQMPWWGLIFAAGLAATFTLPISIITATTNQSPGLNILTEYIIGVILPGKPIANVCFKTYGYMSMSQAVSFLSDFKLGHYMKVPPRSMFIVQIVGTLVAGTVDVGVAWWLLGTIKNICNEDKLPADSPWTCPSDQVFFDASVIWGLVGPKRIFGTLGNYSKLNWFFLIGALGPLVIWLLHKAFPKQKWISMIHLPVLLGATANMPPASTVNFNAWIIVGTIFNYFIFKYRKEWWQRYNYVLAAAMDAGLAFMTILLYFAINMEEKSIDWWGQDEHCELARCPTSKGIVGEWCPVNTG* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1040 720 Pfam OPT oligopeptide transporter protein 26 682 IPR004813 GO:0035673
Apr5g1040 720 PANTHER OLIGOPEPTIDE TRANSPORTER 2 2 717 - -
Apr5g1040 720 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 9 684 IPR004813 GO:0035673
Apr5g1040 720 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 5 687 IPR004648 GO:0055085
Apr5g1040 720 PANTHER ISP4 LIKE PROTEIN 2 717 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1040 Apr-Chr5 15012024 15016387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1040 2 718 Organic Solute Cotransporters AT5G64410 69.487 0.0 1110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1040 - - gmx:100785973 1259.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1040 5 15012024 15016387 Apr5g1040 5 15012024 15016387 ECH