Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1038 ATGGCAGCTGTATCCGATCAACCCACTAGTACATGCACTCACTGTGATCGGGCAATCCCTGCTGCGAACATTGATTTGCATTATGCCCATTGCTCCCGTAACCTTCAAAAATGCAAAGTTTGTGGTGACATGGTTCCAAAGCAACATGCCGAGGAACACTATTTAAACACCCATGCGCCGGTTGCTTGTTCGTTGTGCAGTGAGACAATGGAACGTGATATTTTAGAAATCCATAAAGACGAAAAATGCCCCCGAAGAATTGTCACCTGTGAGTTCTGTGAGTTCCCTTTGCCAGCTATTGATCTGGCTGAGCATCAGGAAGTATGTGGGAATCGAACAGAACTTTGTCACCTTTGTAACAAATATGTTAGACTACGTGAAAAATACAACCATGAAAATAATTGCACAAGAATCCAAAGCAATGCTGTGGGGACTTCAAGGAATGTGCGGCCAGCTGAAAGAGATAGGGGTGCTCGAAGACGGCAGCAGAATGATTTCTCAAGAAGACGTCTTCTTTTCACAATAGCAATCACTGGTATCGCTGTTATCCTTGGATCTATTTTTTTCCAGAGAAAGACAGAGCTCAGCAATGTGCATTAG 600 0.4383 MAAVSDQPTSTCTHCDRAIPAANIDLHYAHCSRNLQKCKVCGDMVPKQHAEEHYLNTHAPVACSLCSETMERDILEIHKDEKCPRRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLREKYNHENNCTRIQSNAVGTSRNVRPAERDRGARRRQQNDFSRRRLLFTIAITGIAVILGSIFFQRKTELSNVH* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1038 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 111 IPR013083 -
Apr5g1038 199 ProSiteProfiles Zinc finger TRAF-type profile. 49 93 IPR001293 GO:0008270
Apr5g1038 199 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 1 199 - -
Apr5g1038 199 PANTHER XIAP-ASSOCIATED FACTOR 1-LIKE 1 199 - -
Apr5g1038 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 57 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1038 Apr-Chr5 14996500 15000875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1038 - - gmx:100306673 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1038 5 14996500 15000875 Apr5g1038 5 14996500 15000875 ECH