Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1031 ATGGATGTTAAGTTTGCCACAGCCTTAATAGTTTTGTATGTAATTTGCCTGAGCAAGAGCAGTGCCTTTGACCCTTGTGCCTCTCAACCCGATGACTCCTCCGATCTCAACGTCATTCCCATCTTCAGCAAATGCTCACCGTTCAACCCACCAAAGACAGACTCGTGGGACAACAGAATCATGAGCATGGCCTCCAAGGACCCAGCCCGAGTCAAGTACTTGTCCACGCTAGTGGAAAAAAAGACCGTCTCCTCGGCCCCGATTGCATCGGGCCAGGCCTTCAACATCGGTAACTACGTGGTGCGGGTCAAAATCGGAACCCCCGGTCAACTCATGTTCATGGTCCTGGACACCAGCACAGACGAGGCCTTCGTCCCATGCTCCGATTGCACGGGCTGCTCCAACACCACTTTCTCGCCCAAAGTCTCCACCAGTTTCGGCCCATTGGACTGTTCCGTTCCGCAATGCGGTCAGGTCCGCGGGCTTTCGTGCCCCGCCATAGGATCCGGCGCGTGTTCCTTCAACCAATCGTACGCAGATTCATCTTTCTCCGCCACGCTCGTCCAAGACTCGCTCAGATTAGCCACTGTTATTATTCCCAAATACTCTTTCGGGTGCATTAATGCCATCTCCGGTGCCTCCATTCCGGCCCAAGGACTTTTGGGCTTGGGCCGTGGCCCATTATCGTTGGTTTCCCAATCCGGGTCTCTCTACTCCGGTGTCTTTTCTTACTGTCTTCCCAGCTTCAAATCCTACTACTTTTCCGGGTCGCTTAAACTCGGACCCGTGGGTCAACCCAAGAGCATTCGGACCACCCCGCTTTTGCGCAACCCGCACCGGCCTTCTCTGTATTACGTGAATTTCACCGGAATCAGCGTGGGGCGTGTACTCGTGCCCGTGCCCAGCGAGTATCTAGCTTTCGACCCGAATACCGGATCCGGAACTATCATCGATTCGGGCACTGTTATAACCCGGTTCGTGGAACCCGTTTACAGCGCAGTGAGGGAGGAGTTCAGAAAACAGGTGACAGGGCCGTTCTCGAGCATTGGAGCATTCGACACGTGTTTTGTGAAGACGTATGAAACGTTGGCACCAGAAATTACGCTTCACTTCACGGGGTTGGACCTGAAGCTGCCATTGGAGAATAGCTTGATTCATAGCAGCGCAGGGTCGCTGGCTTGCCTTGCAATGGCGGCGGCGCCGAACAATGTGAACTCGGTGTTGAACGTGATTGCCAACTTTCAGCAACAGAACCTTAGGATTTTGTTTGATACGGTGAATAATAAGGTTGGCATAGCCCGTGAGGTTTGCAACTAG 1317 0.5338 MDVKFATALIVLYVICLSKSSAFDPCASQPDDSSDLNVIPIFSKCSPFNPPKTDSWDNRIMSMASKDPARVKYLSTLVEKKTVSSAPIASGQAFNIGNYVVRVKIGTPGQLMFMVLDTSTDEAFVPCSDCTGCSNTTFSPKVSTSFGPLDCSVPQCGQVRGLSCPAIGSGACSFNQSYADSSFSATLVQDSLRLATVIIPKYSFGCINAISGASIPAQGLLGLGRGPLSLVSQSGSLYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNFTGISVGRVLVPVPSEYLAFDPNTGSGTIIDSGTVITRFVEPVYSAVREEFRKQVTGPFSSIGAFDTCFVKTYETLAPEITLHFTGLDLKLPLENSLIHSSAGSLACLAMAAAPNNVNSVLNVIANFQQQNLRILFDTVNNKVGIAREVCN* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1031 438 SUPERFAMILY Acid proteases 92 437 IPR021109 -
Apr5g1031 438 Pfam Xylanase inhibitor C-terminal 284 433 IPR032799 -
Apr5g1031 438 Pfam Xylanase inhibitor N-terminal 99 261 IPR032861 -
Apr5g1031 438 PANTHER ASPARTYL PROTEASE-RELATED 7 438 IPR001461 GO:0004190|GO:0006508
Apr5g1031 438 ProSiteProfiles Peptidase family A1 domain profile. 99 433 IPR033121 -
Apr5g1031 438 Gene3D Acid Proteases 74 261 IPR021109 -
Apr5g1031 438 Gene3D Acid Proteases 262 438 IPR021109 -
Apr5g1031 438 PANTHER ASPARTYL PROTEASE AED3 7 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1031 Apr-Chr5 14906943 14908465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1031 62 438 Miscellaneous Gene Families AT1G77480 26.905 3.54e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1031 - - gmx:100816307 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1031 5 14906943 14908465 Apr5g1031 5 14906943 14908465 ECH