Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1029 ATGACCAACACAAGTGCAGAATTGTCTCAGGGGAATGGTGGTGTTTCTCTTCCTTCTCCTAACCCTCAGTCTGGGCCACCAGAGCATCAGCGTTCTCATGGTGGCAGCGGCAATATGATTTTCAAGAGTGGGCCACTTTTCATATCTTCCAAAGGAATTGGATGGACATCCTGGAAGAAAAGGTGGTTTATTTTAACACAAACGTCACTTGTTTTCTTCAGAAGTGATCCAAATGCTGTCCCTCAGAAGGGAAATGAAGTGAATTTGACCCTAGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTATCAAACCAGATAAGAAACTTTTGACAGTACAATTTCCTGATGTTCATGATGGACGAGCTTTCACACTTAAGGCTGAAACTACTGAAGATTTATATGAGTGGAAGACTGCACTTGAGAATGCGTTGGCACAAGCACCTAGTGCTGTCAATGTGATGGAGCAAAATGGTATCTTTAGGAACGATCAGACTGATTCAATTGATATTTCTTTGGACCAGTTAAAGGAGAGAGAACCAGCCAAATCTACTGTCATTGGTCGGCCAATCTTACTTGCTTTGGAGGATGTTGATGGAACTCCATCATTTTTGGAGAAAGCCCTGACATTTATAGAAGAGCATGGAGCTAATGTGGAAGGGATCTTGCGACAAGCAGCTGATGTTGATGAGGTCGAACGTCGTGTTCGAGAATACGAACAAGGAAAAGTTGAGTTTTCTCCGGATGAGGATGCACATGTAGTTGGTGATTGTGTTAAGCATGTGCTTCGGGAATTGCCATCCTCTCCAGTTCCAGCATCTTGTTGTAAGGCACTGTTAGAAGCTTGTCGAACTGAACGTGGGAATAGGGTTGCTGCTATGCGTGCAGCAATAAATGACACTTTCCCTGAACCAAATCGTCGCTTATTGCAAAGAATACTCACAATGATGCAAGCTGTGGCTTCACGCAAAGCTGTTAATAGAATGAGCTCCTCAGCTGTGGCAGCTTGCATGGCACCTTTACTTCTTCGCCCCCTTCTGGCTGGAGAATGTGAGATTGACAATGATTTTGATGTAGGTGGTGATGGTTCTGTTCAACTTTTACAAGCAGCTGCTGCAGCGAACCATGCTCAAGCAATTGTTATAACTTTATTAGAAGAATATAACAACATATTTGGGGTAATATATCTCACTATTCCTTTTTGCATGCAGGAAGGTTCTGTGTCCCCTGATATATACACTGACTCAGAAGAAGAGAGTGGATCTGAGAGTGAGGAAGCTACTGATGATGATTTGTCCTACGAGGATGATGATGATGATTATGATGATGACGATGAACAAGATGAATCAGTACAGGAGTCTGATGCAGAAGCAGATGATGATCTTGTTAGCGAATCGTACAGTGAAACTGGAGAATCTGAGGCTGATGATGCAGGCGACGATGAGGACCATGATCATGCTAGTTCTAGTTCAAAATCTTCAAGTGCTAGTGAAGAATTGAAAGCCGAAAAAAAATTATCATCAAAGTCACTTGAAGGTTCACTGAATCAACCCGAAGATATAAAAAAAAAATCTGAAAATCTCACAAGTCCAAATAAGACTGCTCATGCAGATCAGTCCAATAAGCCTGCTGGTATAGTTGGAGTGTCCACTGACCAGGTTAAATTGCATAATTCAAATTCTCCTAGTCCTTTATGTATCAAAAAATCGAATACCATGTCCAATGGGCCAGCACCTCGGCACCGCACCATGTTGGGGCGAGTCTCTGCAAGGAAGAATCTTTCCATGGAATCCATAGATTATTCTGTCGATGATGAAGATGAGATTGAAAGGCTTGAAGCTGCTAGGGCAGAATTACAAACTCAAATCGCAGATGAAGTGAAGGCAAATGCAAAGTTGCAATCCCATATGGATAACCGAAAGAAAGCCTTGGAAGAACGTCGTCTGGCTCTAGAGCAAGATGTGGCTAGACTACAGGAGCAGTTGAACAAGGAAAAGAATTCTCGGATAGCTCTTGAGAACAAGGCAGGGCTTGAGGAATTAGCTCTGGTAGAAGCAGACCTTGCTAACTTAGAGTGGAAGGTTGAGGAGCTTGGAGTCAGGCTTAATGCACAACTTGAGCGAAATTATGGATCCAGTTTGGAAATCTCTAATCTACCGCGACAGATATCAAATAAAGAGAGAAAATCGAAAAACAAGGCAGATACTGAAGTTCCTGCCATATCACAAACTGACAGGTCAATAAGTAAGGACACTCATATTGGTGGAGCAGAAAGTGATACTGAGAGAAAGCCAGAGCCAGCACCTACATCAAACAAACATCCACCAACTAGCTCCAAGAAATCTAGTACAAAGGGTGAGGGAGCAAATTTCACTCCTTCTGCAATGACAAAACTGACATCCAGACTGAACTTTTTGAAGGTGAGCCGAAATCAGATTGCAAACGAACTCCAAAATATGGATAAAGGCCGAGAGTCAAGTCGCTCTGCACACAACGTGGAAAAAGGAAAAGGACATGACCGTCCTCAAGCACTTCCATCCCCTCATAGATATGGAGGGTCTGAAGCTCATCATTCTGTCCCAAACCCAGAAAGAGTTAGAGGCTCGGACAATTCTCAGTCACTGCAGATTTCAGATAAAGGATCGAGCAAAGGTAAATCACATCAAAGTTCAGACAAATTGAGGAAATCAGATAGCCACCCAAGCCACCACACAGATGGATGGAATCAGCAACCAAAACATTTGGAAAGAGGAAGATCAGAAGGTCATCAGACTTTTAATGTGGATAAAGGTCGGTGA 2799 0.4294 MTNTSAELSQGNGGVSLPSPNPQSGPPEHQRSHGGSGNMIFKSGPLFISSKGIGWTSWKKRWFILTQTSLVFFRSDPNAVPQKGNEVNLTLGGIDLNNSGSVVIKPDKKLLTVQFPDVHDGRAFTLKAETTEDLYEWKTALENALAQAPSAVNVMEQNGIFRNDQTDSIDISLDQLKEREPAKSTVIGRPILLALEDVDGTPSFLEKALTFIEEHGANVEGILRQAADVDEVERRVREYEQGKVEFSPDEDAHVVGDCVKHVLRELPSSPVPASCCKALLEACRTERGNRVAAMRAAINDTFPEPNRRLLQRILTMMQAVASRKAVNRMSSSAVAACMAPLLLRPLLAGECEIDNDFDVGGDGSVQLLQAAAAANHAQAIVITLLEEYNNIFGVIYLTIPFCMQEGSVSPDIYTDSEEESGSESEEATDDDLSYEDDDDDYDDDDEQDESVQESDAEADDDLVSESYSETGESEADDAGDDEDHDHASSSSKSSSASEELKAEKKLSSKSLEGSLNQPEDIKKKSENLTSPNKTAHADQSNKPAGIVGVSTDQVKLHNSNSPSPLCIKKSNTMSNGPAPRHRTMLGRVSARKNLSMESIDYSVDDEDEIERLEAARAELQTQIADEVKANAKLQSHMDNRKKALEERRLALEQDVARLQEQLNKEKNSRIALENKAGLEELALVEADLANLEWKVEELGVRLNAQLERNYGSSLEISNLPRQISNKERKSKNKADTEVPAISQTDRSISKDTHIGGAESDTERKPEPAPTSNKHPPTSSKKSSTKGEGANFTPSAMTKLTSRLNFLKVSRNQIANELQNMDKGRESSRSAHNVEKGKGHDRPQALPSPHRYGGSEAHHSVPNPERVRGSDNSQSLQISDKGSSKGKSHQSSDKLRKSDSHPSHHTDGWNQQPKHLERGRSEGHQTFNVDKGR* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1029 932 MobiDBLite consensus disorder prediction 751 769 - -
Apr5g1029 932 MobiDBLite consensus disorder prediction 865 884 - -
Apr5g1029 932 MobiDBLite consensus disorder prediction 530 578 - -
Apr5g1029 932 Pfam PH domain 42 145 IPR001849 -
Apr5g1029 932 MobiDBLite consensus disorder prediction 814 932 - -
Apr5g1029 932 ProSiteProfiles Rho GTPase-activating proteins domain profile. 193 392 IPR000198 GO:0007165
Apr5g1029 932 MobiDBLite consensus disorder prediction 885 932 - -
Apr5g1029 932 SUPERFAMILY GTPase activation domain, GAP 201 394 IPR008936 GO:0007165
Apr5g1029 932 SMART RhoGAP_3 199 389 IPR000198 GO:0007165
Apr5g1029 932 MobiDBLite consensus disorder prediction 1 36 - -
Apr5g1029 932 Gene3D - 28 147 IPR011993 -
Apr5g1029 932 Gene3D Rho GTPase activation protein 170 394 IPR008936 GO:0007165
Apr5g1029 932 Pfam RhoGAP domain 202 345 IPR000198 GO:0007165
Apr5g1029 932 ProSiteProfiles PH domain profile. 39 146 IPR001849 -
Apr5g1029 932 SMART PH_update 40 148 IPR001849 -
Apr5g1029 932 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 3 826 - -
Apr5g1029 932 MobiDBLite consensus disorder prediction 736 750 - -
Apr5g1029 932 CDD RhoGAP 202 340 - -
Apr5g1029 932 MobiDBLite consensus disorder prediction 410 589 - -
Apr5g1029 932 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 3 826 - -
Apr5g1029 932 CDD PH 42 141 - -
Apr5g1029 932 MobiDBLite consensus disorder prediction 773 796 - -
Apr5g1029 932 MobiDBLite consensus disorder prediction 1 19 - -
Apr5g1029 932 MobiDBLite consensus disorder prediction 821 844 - -
Apr5g1029 932 MobiDBLite consensus disorder prediction 721 796 - -
Apr5g1029 932 MobiDBLite consensus disorder prediction 416 481 - -
Apr5g1029 932 Coils Coil 602 629 - -
Apr5g1029 932 SUPERFAMILY PH domain-like 8 146 - -
Apr5g1029 932 Coils Coil 641 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1029 Apr-Chr5 14881632 14896620 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1029 - - gsj:114415231 1284.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1029 5 14881632 14896620 Apr5g1029 5 14881632 14896620 ECH