LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr5g1027	ATGGCATCAATCTCAGGTATTTGCTCCTCTTCCCCAACCCTTAAAAAATTCCAATACCAACCTCCACCGTTGACCAACACTCTCCGCAAAGAACACGTGTCGTTCCCCGCGCGTCGCGTTGATCGGACTCTGAGCCTCGCCTGTGCTCACTCGGTCGCTCGGGAGGTTCCGGCGGAGGTTTCCGATGGAGCGGTGGTGGCGAGTGAGAAGAAGGGGCTGGAGAAAGATCCACGTGCGCTGTGGCGGAGATACGTGGATTGGTTGTATCAACATAAGGAACTGGGGCTTTACCTTGACGTGAGTCGGGTCGGGTTCACGGAGGAGTTCGTGAAGGAAATGGAGCCCCGGTTTCAAACGGCGTTTCGAGCGATGGAGGAGTTGGAGAAGGGCGCAATTGCGAACCCCGATGAGGGTCGCATGGTTGGACACTATTGGTTGAGGGACCCTAAACGCGCTCCCAATTCCTTCCTCAGGACGCAGATTGAGAACACTCTCGACGCCGTTTTGAAGTTTGCTCAGGATGTCGTCACCGGTAAGATTAAGCCTCCCTCGTCTCCTGAAGGTCGCTTTACTCAAATACTGTCTGTTGGAATTGGAGGTTCAGCTCTTGGACCACAGTTTGTTGCAGAGGCATTGGCTCCTGATAATCCTCCACTTAAGATAAGATTTGTTGACAACACTGATCCTGCTGGAATTGATCATCAGATTGCACAACTTGGATCTGAGCTAGCCTCTACACTTGTGATTGTGATTTCAAAGAGTGGAGGTACCCCAGAGACTAGAAATGGTTTATTAGAAGTACAGAAGGCCTTTCGTGACGCAGGCTTGGATTTTCCGAAACAGGGTGTTGCTATAACACAAGAAAATTCTCTGTTGGATAACACTGCCAGAATTGAGGGCTGGTTAGCTAGATTTCCCATGTTTGATTGGGTGGGAGGTAGAACGTCGGAGATGTCTGCAGTTGGCCTGCTTCCAGCAGCCCTTCAGGGCATTGACATCACAGAAATGCTTGCTGGTGCATCATTGATGGATGAGGCAAATAGAAGTATTGTGTTAAGGAACAACCCTGCTGCTCTGCTGGCTTTATGTTGGTATTGGGCTACAGATGGTGTAGGATCCAAGGATATGGTTATTCTTCCGTACAAGGACAGCCTACTATTATTTAGTAGATACTTGCAGCAGTTGGTCATGGAATCTCTAGGCAAGGAGTTTGACTTGGACGGTAATCGGGTTAATCAAGGAATCAGTGTCTACGGAAATAAAGGCAGCACTGATCAGCATGCCTATATTCAACAATTGAGGGAAGGTGTGCACAATTTCTTTGTGACGTTCATTGAGGTTCTACGTGATAGACCCCCTGGTCATGATTGGGAGCTTGAACCAGGTGTCACATGTGGAGACTACTTGTTTGGTATGCTACAGGGAACAAGGTCAGCATTGTATGCTAATAACCGAGAGTCCATCACAGTCACTGTACAAGAAGTGACGCCAAGATCAGTTGGTGCTCTTATTGCACTCTATGAACGAGCAGTAGGAATATATGCCTCTCTTGTTAACATAAATGCTTATCATCAACCTGGTGTGGAAGCTGGTAAAAAAGCAGCAGGTGAAGTACTGGCACTTCAGAAGCGCGTATTGGCAGTGCTAAATGAGGCAAGTTGCAAAGAGCCTGTTGAGCCATTGACCCTGGAAGAAGTAGCTGAACGTTGCCATGCTCCAGAAGATATTGAAATGATTTTCAAGATTATTGCACACATGGCCGCCAATGACAGAGCACTTATTGCTGAAGGCAGCTGCGGTTCACCGCGAAGCATCAAGGTTTTTCTTGGGGAATGTAACGTTGGTGAATTGTATGCTTGA	1860	0.4806	MASISGICSSSPTLKKFQYQPPPLTNTLRKEHVSFPARRVDRTLSLACAHSVAREVPAEVSDGAVVASEKKGLEKDPRALWRRYVDWLYQHKELGLYLDVSRVGFTEEFVKEMEPRFQTAFRAMEELEKGAIANPDEGRMVGHYWLRDPKRAPNSFLRTQIENTLDAVLKFAQDVVTGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFVDNTDPAGIDHQIAQLGSELASTLVIVISKSGGTPETRNGLLEVQKAFRDAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQGIDITEMLAGASLMDEANRSIVLRNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFVTFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESITVTVQEVTPRSVGALIALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTLEEVAERCHAPEDIEMIFKIIAHMAANDRALIAEGSCGSPRSIKVFLGECNVGELYA*	620

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr5g1027	619	PRINTS	Glucose-6-phosphate isomerase signature	193	212	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr5g1027	619	PRINTS	Glucose-6-phosphate isomerase signature	305	323	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr5g1027	619	PRINTS	Glucose-6-phosphate isomerase signature	381	402	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr5g1027	619	PRINTS	Glucose-6-phosphate isomerase signature	483	501	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr5g1027	619	PRINTS	Glucose-6-phosphate isomerase signature	501	515	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr5g1027	619	PRINTS	Glucose-6-phosphate isomerase signature	515	528	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr5g1027	619	Pfam	Phosphoglucose isomerase	480	540	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr5g1027	619	Pfam	Phosphoglucose isomerase	123	449	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr5g1027	619	Gene3D	-	330	524	-	-
	Apr5g1027	619	ProSiteProfiles	Glucose-6-phosphate isomerase family profile.	73	548	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr5g1027	619	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	619	-	-
	Apr5g1027	619	CDD	SIS_PGI_2	374	538	IPR035482	-
	Apr5g1027	619	Hamap	Glucose-6-phosphate isomerase [pgi].	93	542	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr5g1027	619	ProSitePatterns	Phosphoglucose isomerase signature 2.	515	532	IPR018189	GO:0004347\|GO:0006094\|GO:0006096
	Apr5g1027	619	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	619	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr5g1027	619	Gene3D	-	143	329	-	-
	Apr5g1027	619	SUPERFAMILY	SIS domain	80	542	IPR046348	GO:0097367\|GO:1901135
	Apr5g1027	619	CDD	SIS_PGI_1	162	328	IPR035476	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr5g1027	Apr-Chr5	14866354	14873013	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr5g1027	K01810		-	gmx:100791285	1145.18

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr5g1027	5	14866354	14873013	Apr5g1027	5	14866354	14873013	ECH