Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1017 ATGGAAAACAAAAACGAGTCATCCATCTCGACCAAAACCCGAAACTGCATCGGGTCGGATCCTAACTCGCCACCCCCAGACCAAGTACTAGAAATAGTACTAGAAAACGTCCTTCACTTCCTCACCTCACGCCGCGACCGCAACGCCGCCTCATTGGTCTGCAAATCATGGTACCGCGCCGAAGCCCTCACCCGATCCCACCTCTTCATCGGCAACTGCTACGCCCTCTCTCCAATACGCGCCACCTCACGCTTCCCGCGCGTGCGCTCCGTCACCATCAAAGGGAAACCTCGCTTCGCAGATTTCGATCTCATGCCCCTCAATTGGGGTGCCCACTTCAGCCCTTGGGCCACCGCATTCACCACCTCTTACCCTTCCCTTCACCACCTTCACCTCAAACGCATGTCCCTCACCGATCACGATCTCTCTCTCATCGCTCACTCCTTCCCTTCTTTCACCCAACTCGTTCTCATCTGTTGCGAAGGCTTCGCCACCGCCGGCCTCGCCGCCGTCGCCGCCAACTGCAGATTTTTGAGAGTGCTTGAACTTGTAGAATCTGTGGTTGAGGTTGGTGACGACGAGGAAGAAGTGGATTGGATATCGTGTTTTCCTGAGACTCAGACTCATTTGGAGTCTCTTGTTTTTGACTGTGTTGAATGTCCGGTTAATTTTGAGGCTTTGGAGAGGCTTGTGGCTAGGTCTCCTTCGTTGAAGAAGCTTAGGTTGAATCGATATGTTTCCATCTCTCAGATGTACCGTTTGATGCATCGAGCGCCGCATCTCACGCATCTTGGAACTGGGTCTTTTGGTGCTTCTGAGGTTATGGCTGTTGGGGATCATGAACCTGATTACGCATCTGCATTTGCAGCTTGCAAATCCTTGGTTTGTTTGTCTGGATTTAGGGAAATTTGGCCGGATTATCTGCCTGCTATTTACCCTGTTTGTGCAAATCTCACATCTTTGAATTTCAGCTATGCTGATATCAATGCAGATCAGCTCAAATCAGTGATTCGCCACTGCCATAAGCTTAAGACGTTCTGGGTTCTTGATTCAATATGTGATGAAGGGCTTCAAGCAGTGGCTGCGACTTGCAAAGATTTGCGGGAGCTTCGAGTTTTCCCTGTTAACACAAGGGAGGAGACAGAAGGTCCTGTTTCTGAGGTGGGGTTTGAGGCAATTTCTCGAGGTTGTAGGAAATTGCAATCAATTCTGTTTTTCTGCCAGAGAATGACAAATGCAGCTGTGGTAGCCATGTCAAAGAACTGCCCTGATCTTGCGGTGTTTCGATTGTGTATAATTGGTCGATATCGGCCAGACCCCGAGACACTAGAACCCATGGATGAGGGTTTTGGTGCCATTGTTATGAACTGCAAGCAGCTCACTAGGCTTGCCGTGTCTGGTTTGCTGACTGATCGAGCTTTTGGTTACATTGGGATGTATGGGAAGTTGATTAGGACACTGTCAGTTGCCTTTGCTGGAGACACAGACATGGGCCTCAAGTATGTGCTAGAAGGATGCCCCAAGCTGCAAAAGCTTGAAATCAGGGATAGTCCATTTGGCGACAGAGCTCTGCGTTCTGGTTTGCATCATTTTTACAACATGAGGTTCCTCTGGATGTCGTCCTGCAAATTGACGCGCCAAGCTTGTCAAGAAGTTGCGCGAAGGTTGCCCCATCTGGTGTTGGAAGTCATCAATAGTGAAGAGGACAAAGTTGATGAGATTGAGATTCTGTACATGTATAGGTCTCTTGACAGGCCACGGGACGATGCTCCAAAAGTTGTTACAATCCTTCGTTAG 1797 0.4936 MENKNESSISTKTRNCIGSDPNSPPPDQVLEIVLENVLHFLTSRRDRNAASLVCKSWYRAEALTRSHLFIGNCYALSPIRATSRFPRVRSVTIKGKPRFADFDLMPLNWGAHFSPWATAFTTSYPSLHHLHLKRMSLTDHDLSLIAHSFPSFTQLVLICCEGFATAGLAAVAANCRFLRVLELVESVVEVGDDEEEVDWISCFPETQTHLESLVFDCVECPVNFEALERLVARSPSLKKLRLNRYVSISQMYRLMHRAPHLTHLGTGSFGASEVMAVGDHEPDYASAFAACKSLVCLSGFREIWPDYLPAIYPVCANLTSLNFSYADINADQLKSVIRHCHKLKTFWVLDSICDEGLQAVAATCKDLRELRVFPVNTREETEGPVSEVGFEAISRGCRKLQSILFFCQRMTNAAVVAMSKNCPDLAVFRLCIIGRYRPDPETLEPMDEGFGAIVMNCKQLTRLAVSGLLTDRAFGYIGMYGKLIRTLSVAFAGDTDMGLKYVLEGCPKLQKLEIRDSPFGDRALRSGLHHFYNMRFLWMSSCKLTRQACQEVARRLPHLVLEVINSEEDKVDEIEILYMYRSLDRPRDDAPKVVTILR* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1017 598 Pfam F-box 27 67 IPR041567 -
Apr5g1017 598 Gene3D Ribonuclease Inhibitor 66 597 IPR032675 -
Apr5g1017 598 Pfam Transport inhibitor response 1 protein domain 86 132 IPR041101 -
Apr5g1017 598 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 19 596 - -
Apr5g1017 598 SUPERFAMILY F-box domain 27 61 IPR036047 GO:0005515
Apr5g1017 598 PANTHER F-BOX PROTEIN FBX14 19 596 - -
Apr5g1017 598 Gene3D - 21 65 - -
Apr5g1017 598 MobiDBLite consensus disorder prediction 8 22 - -
Apr5g1017 598 MobiDBLite consensus disorder prediction 1 23 - -
Apr5g1017 598 SUPERFAMILY RNI-like 104 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1017 Apr-Chr5 14769094 14771864 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1017 - - aprc:113865934 1167.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1017 5 14769094 14771864 Apr5g1017 5 14769094 14771864 ECH