Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1012 ATGAGCAAGTCTCCGCGCAGAGATCTACAAGTCTTCGATTTCAAGGAAGAGGATGAAATTGCCTCCGATAAACACGATTTTCTCGCTCGCGATTCCCAGGTCAACAAGGTTGGCATAAATAGTGTTGCCAGTATTCCTTGTGTTGATGTTGATGTAGCTGGTGCTATTTTTAATCTGGGAAAAGGTGGTTCCGACCCCTCTTCTGATACAATGGAATATATATATGATAGCAAAGAGAAGAGCTCTGAGTTGGAAGCTGCTAATCAATCTAATTCAGTTAGTCATGAAAATCACCGTCACTGTAAAATAGATATGCATAACTATGATGAACCAGAGAAAATGGATACAAATGAAGTATCATCACCTGAAACGAGCCAGATTGATCCTTCAGGGTCTTCATACAGTAATGAATCAGTTGATGTCAATTCAGAGGCTGATGAGGGCATGAATGAGAGTGCTCCAACAAGTCCTGCTTCTGATATTGCAGAGAATGTTTCATTAAATGGTCATGGATTCAATGGCACAGACAATTCTGACATGGATGACACAAATACAGAATTCAATACTTCAACTGCATGTATAAAGCAAGAAGCCTTTGATCTTGAATGGGCAGTTGATGATCTCATTGATATTAAGTGTCAGTTGTTTAAAAATAGTGGAATGGTCATTATGAAGCTTCGTGTCATATCAATTAATGCAACCCAGTCAAATCATGTTAGCGATGCTTCAGGCATTGAGGAATTGGAGATTGCGGTTGTTGATTCCAATTGGTCTCAGAGACATAAACAGATCACATCTCTTAATATGAAATACTTGGCTATTTGGAACATTGTGCTTCATATGGATGTAGAAGGCCATGAAACTGATTCATGTGGATCAAGATGCTACTTCCCTAATTTTGAGGAGCCTTTTGATGAAGTTGTCTATCCTAAAGGGGATCCAGATGCTGTTTCCCTAAGCAAGAGAGATGTAGATCTCTTGCAACCTGACACATTCATTAATGACACAATTATTGATTTTTACATCCAGTATCTCAAGAATCAAATACAAGAGGAGGAAAAGCCTAGATTTCACTTTTTTAATAGTTTTTTCTTTAGAAAGCTGGCTGATATGGACAAAAATCCATCTAGTGCTTCTGATGGAAAAGCAGCATTTTTACGTGTTCGTAAATGGACAAGAAAAGTAAATTTATTTGCAAAGGATTATATCTTCATTCCCGTGAACTTCAGTCTCCACTGGAGTTTAATAGTCATATGCCATCCTGGTGAAGTGGTTAATTTTAATGATAAGGAGCTGGACAAGTCACTTAAGATACCTTGTATATTGCATATGGATTCTATAAAAGGAAGTCATAGTGGTCTGAAAAACCTGGTGCAAAGTTACTTGTGTGAAGAATGGAAAGAGAGACATAAGGATGCATTGGAAGAAGACCTTTCATCAAGATTCTTTAATATGCGCTTTCTTCCACTTGCGTTGCCGCAGCAAGAAAACTCGTATGATTGTGGCCTCTTTTTGCTGCACTACCTAGAGCTCTTCCTGGCTGAAGCACCTCTTAATTTCAATCCATTCAAACTAACCAAGTTTTCCAACTTTCTCAATGTGGATTGGTTTCTCCCTGCTGAGGCATATCTTAAGCGAACACTGATCCAGAGGTTAATCTTTGAACTTGTGGAAAACGATGGTTCACATGAAATCTCTTCCTCTGACTGTAGTGATGACGATGAGTGCTTAGAAAATAATGGGAACAGAACTGGGATTGAGCATCCTGAAGTCAATAGGGAGTCAACAACTTCCCATACTGGGCAGGGTATAGAAATCACTCTATTGTCTGGTTCATCATCTTTGGATCCTCAATCCTTTAACAATTCAGGCTTGGTTCTCAAAGAGCTTTTTGAGCCTGGAGCTACTGCAGGAACCATATTGGGACAGTGTCAATCTTTTGACCAGCGCTCATCTGATTATCGTTTCAATGGTTCAATGTTTTCGATGGAGGAAGACACAGATCTTGGAGAACAGTTTATGTTCTTGGCTACAGATTCCAACTTCCAGCAAGTGGCTGGAATTACACCTCAAGCATGTTCTTTGCCATATTTTCCCACTAGAGATTGTGAAGATGAGGCATGTCAGAGACAAGAAATCTCTTTGCAAGCAGAGCATGATGTGGTTGAGTCATCTCTAGATGCATTAAGTGGTGCTTCAGATGATTCAGAAGATGTAAGGGTTACTGAAAACTGCCCCGTTGGGAATGAGCCCGGATCATCTAATGAAGCTGAAGGTGAGAAAACTTATTCACCCGCGGAAAATCCTGATGATGTTATTGATATTTCCACCTCTGTCGTGGGAATTTCTCAAGACCCAATTACGAAGTGTGATGATAACAAGAATGAAGATCTCCACCCTTCTGGTGAAGAAATCCCCACAATACCATTGCAACAAGTTTCTGATGCAGTAGATGACGAGGCCGCATGTGATGATGGTCTGATGATTGATGGCATGGCTCCTGATATTTGTGAGGAACAAGCTCCAAAGAGGCGGCGGGTTATGCCTCTACAATGCAGAAGTGAGGGCATTGTGACAGAATCCAATTTGTAG 2592 0.4028 MSKSPRRDLQVFDFKEEDEIASDKHDFLARDSQVNKVGINSVASIPCVDVDVAGAIFNLGKGGSDPSSDTMEYIYDSKEKSSELEAANQSNSVSHENHRHCKIDMHNYDEPEKMDTNEVSSPETSQIDPSGSSYSNESVDVNSEADEGMNESAPTSPASDIAENVSLNGHGFNGTDNSDMDDTNTEFNTSTACIKQEAFDLEWAVDDLIDIKCQLFKNSGMVIMKLRVISINATQSNHVSDASGIEELEIAVVDSNWSQRHKQITSLNMKYLAIWNIVLHMDVEGHETDSCGSRCYFPNFEEPFDEVVYPKGDPDAVSLSKRDVDLLQPDTFINDTIIDFYIQYLKNQIQEEEKPRFHFFNSFFFRKLADMDKNPSSASDGKAAFLRVRKWTRKVNLFAKDYIFIPVNFSLHWSLIVICHPGEVVNFNDKELDKSLKIPCILHMDSIKGSHSGLKNLVQSYLCEEWKERHKDALEEDLSSRFFNMRFLPLALPQQENSYDCGLFLLHYLELFLAEAPLNFNPFKLTKFSNFLNVDWFLPAEAYLKRTLIQRLIFELVENDGSHEISSSDCSDDDECLENNGNRTGIEHPEVNRESTTSHTGQGIEITLLSGSSSLDPQSFNNSGLVLKELFEPGATAGTILGQCQSFDQRSSDYRFNGSMFSMEEDTDLGEQFMFLATDSNFQQVAGITPQACSLPYFPTRDCEDEACQRQEISLQAEHDVVESSLDALSGASDDSEDVRVTENCPVGNEPGSSNEAEGEKTYSPAENPDDVIDISTSVVGISQDPITKCDDNKNEDLHPSGEEIPTIPLQQVSDAVDDEAACDDGLMIDGMAPDICEEQAPKRRRVMPLQCRSEGIVTESNL* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1012 863 ProSiteProfiles Ubiquitin-like protease family profile. 317 512 IPR003653 GO:0006508|GO:0008234
Apr5g1012 863 MobiDBLite consensus disorder prediction 729 771 - -
Apr5g1012 863 Gene3D - 309 554 - -
Apr5g1012 863 MobiDBLite consensus disorder prediction 106 183 - -
Apr5g1012 863 MobiDBLite consensus disorder prediction 579 599 - -
Apr5g1012 863 MobiDBLite consensus disorder prediction 579 594 - -
Apr5g1012 863 SUPERFAMILY Cysteine proteinases 309 556 IPR038765 -
Apr5g1012 863 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 8 855 - -
Apr5g1012 863 MobiDBLite consensus disorder prediction 118 183 - -
Apr5g1012 863 MobiDBLite consensus disorder prediction 747 761 - -
Apr5g1012 863 Gene3D - 357 489 - -
Apr5g1012 863 MobiDBLite consensus disorder prediction 79 98 - -
Apr5g1012 863 MobiDBLite consensus disorder prediction 784 806 - -
Apr5g1012 863 Pfam Ulp1 protease family, C-terminal catalytic domain 332 528 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1012 Apr-Chr5 14719989 14729260 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1012 K08596 - gmx:100800444 1323.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1012 5 14719989 14729260 Apr5g1012 5 14719989 14729260 ECH