Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1003 ATGGGTTCACTACCCAATTTAGAAACCCCTCCTCTGAGCTCTAGAATCTCAACAGTGGTTCCAGCAACCCCTCGAGGCGAGCAAAACGGTGCGTATCAACTCAACTACATGGACTTACTCATGAAGCTCCACTATATTCGACCCGTTTATTTTTTCAACTCCGAAGCCGTAAGAGGCCTCGCAATTTCCGACATGAAGAAACCCATGTTCCTACTCCTCGACCCGTATTCACACGTTTCGGGTCGGATCAGGAGATCCGAATCGGGACGCCCGTTCATAAAGTGCAACGACGCTGGCGTTCGCATCGCCGAGTCACACTGTGACAAAACCCTCCAAGAATGGTTCGATGAAAATGGGTACTGTGTTGATGGACTCGTTCATGATCATGTGCTTGGTCCTGATCTTGGCTTTTCTCCTCTTGTTTTTGTCAAGTTCACCTGGTTTAAGTGTGGAGGACTATCTCTGGGATTGAGCTGGGCTCATGTCCTTGGAGATGCATTTTCAGCTTTCAACTTCATCAACAAGTGGAGTGAAGTACTAGCTGGTCAAGCGCCTCCAAAATCTCTGCACATGCCAAAACTCTCTGAACCTCAACTAATACCTCATTCCATTTCTCATAAGCCTCCCATTTCCATTAAAAGGGTCACAATTGTTGGGGAATATTGGCTTGCTACTAATGATAGCGATGTGGCTACTCACTCTTTTCACCTCACTTCTAAACAACTGCACCAATTGGTAACTACCACATCTAATCAAACCATTGACACTAGCGATAAAATCAATACCTCTTATTTTGAAATTATTTCAGCACTGGTATGGAAATGTATATCAAACATAAGGGAAGAACCAAAAGTCGTGACAATATGCACAATTAGCTCTAATCGTGCTGGAAATGAAATCCCCACCAATGGCTTGATGTTAAGCAAAGTTGAAGCAAATTGCTCACTCCAAAAATGTGATGTATCCAAATTAGCAAAGTTGATTGCTGAAGAAAAGATGGTTGAAAACCATATAATGGAAAAGTTGGTGGAGGAAGATGATGGGAAAGAGGATTTTATAATGTATGGAGCAAATTTGACATTTGTGGATTTGGAAGAAGCTAACATTTATGGGCCAAAGTTGAATGGTCAGAAACCAATTATGTCAAACTGTACATTCCGTGGGGTGGGTGATAAAGGGGTCGTTTTGGTGCTCCCAGCACCGGAAGATAATGAAGGTGACAAAGATGGAAGGATCGTTACTATTTCTTTGCCTGAGAAAGAACTAGACCAACTGAAAGATAAATTAGGAGGAGAATGGGGTATTCATTAG 1311 0.4272 MGSLPNLETPPLSSRISTVVPATPRGEQNGAYQLNYMDLLMKLHYIRPVYFFNSEAVRGLAISDMKKPMFLLLDPYSHVSGRIRRSESGRPFIKCNDAGVRIAESHCDKTLQEWFDENGYCVDGLVHDHVLGPDLGFSPLVFVKFTWFKCGGLSLGLSWAHVLGDAFSAFNFINKWSEVLAGQAPPKSLHMPKLSEPQLIPHSISHKPPISIKRVTIVGEYWLATNDSDVATHSFHLTSKQLHQLVTTTSNQTIDTSDKINTSYFEIISALVWKCISNIREEPKVVTICTISSNRAGNEIPTNGLMLSKVEANCSLQKCDVSKLAKLIAEEKMVENHIMEKLVEEDDGKEDFIMYGANLTFVDLEEANIYGPKLNGQKPIMSNCTFRGVGDKGVVLVLPAPEDNEGDKDGRIVTISLPEKELDQLKDKLGGEWGIH* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1003 436 Gene3D - 13 212 IPR023213 -
Apr5g1003 436 Gene3D - 224 428 IPR023213 -
Apr5g1003 436 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 433 - -
Apr5g1003 436 Pfam Transferase family 17 284 - -
Apr5g1003 436 PANTHER PROTEIN ECERIFERUM 2 10 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1003 Apr-Chr5 14647671 14651029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1003 9 429 Acyl Lipid Metabolism Gene Families AT4G24510 42.237 2.32e-106 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1003 - - gmx:100782113 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1003 5 14647671 14651029 Apr5g1003 5 14647671 14651029 ECH