Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0985 ATGGGAAATGTCCTCAACGAAGCAGAAACAGAGCGTCCACTGATACAGTCAACGCCACCCTCTCTCTCTCTGTTCCAACGAACATGTTCCGAATCCAGGAAACTCTGCCACATAGCTGCACCCTCCATCTTCAGCCGCCTCGCCATGTTCTCCATCACCGTCGTCACCCAGTCCTTCGCCGGCCACCTCGGTGACCTCGATCTCGCCGCCATCTCCATTGCCTGCACCGTTCTCATCTCCATTACCTTCGGCTTCTTGCTGGGTATGGCGAGTGCGCTTGAGACACTCTGCGGGCAAGCTTACGGCGCGGGACAGCAGCACATGTTGGGCATTTACTTACAACGTTCGTGGGTGGTTCTATTTATGTCATCCGTTTTAATGTTGCCCATGTTCTTGTTCGCCACGCCTCTATTGAAGTTCATAGGACAACCCGATGCGGTGGCGGAGCAAGCGGGTGTGGTGGCCTTTTGGTTGATACCGTTTCACTTGAGCTTCCCGTTTCAGTTCACGCTGCAGAGGTTCTTGCAGTGCCAGCTGAAGACCGCTATCATAGCCTGGGTTTCTGGGGGAGCTCTTGCCATCCATGTGCTAGTGAGTTGGGTTTTTGTCGAGAAGATGAGAATTGGGATTGTTGGAACTGCACTAACCATTGGTTTCTCCTGGTGGCTCTCGGTTTTGGGATTGCTTGGGTATACCATCTTTGGTGGGTGTCCTCATTCTTGGACTGGTTTTTCTGCTGAAGCTTTTGTTGGCCTGTGGGAGTTCTTCAAACTCTCTTTCGCTTCTGGGGTCATGGTTGCGTTAGAGAACTTTTATTACAGACTTTTGCTTATAGTGTCTGGGTATATGCACAACACTGAGATTGCGATCGATGCTCTTTCCGTCTGTGTAACTATATATGGTTGGGAATCAATGATACCGCTTGCATTTTTGGCTGCAACCGGGGTGCGTGTAGCAAACGAGCTTGGCGCAGGCAATGCAGAAGGGGCAAAATTTGCCACTGTTGTTTCAGTGGTAAATACTGTGTTAGTGGGATTTATATTTTGGTTGATAATTGTGGTCTTCAATGAGCAGCTTGCGTTGATCTTTACGTCGAGCTCGTCTGTTATCCAAATGGTCAATGAGCTGGCAATCTTGTTAGCCTTTACTATCCTTCTTAATTGCATTCAACCAGTTCTTTCAGGGGTAGCAGTTGGATGTGGTTCGCAAGCTGTGGTGGCTTATATAAACGTTGGTAGTTACTACTTGGTTGGAATACCTCTCGGGATTCTCCTAGGCTCGTTGCTACCTTCGGGTATTGTTGGTATGTGGACTGGAATGATGAGTGGAACGGTGGTTCAAACATTGATCTTGACTTTGATCACGATGAGATATGATTGGGACAAAGAGGTACGAAAAGCCCAGGTTCTTATTATAGAGGAGGCATCGCCCAACAGATAA 1440 0.4854 MGNVLNEAETERPLIQSTPPSLSLFQRTCSESRKLCHIAAPSIFSRLAMFSITVVTQSFAGHLGDLDLAAISIACTVLISITFGFLLGMASALETLCGQAYGAGQQHMLGIYLQRSWVVLFMSSVLMLPMFLFATPLLKFIGQPDAVAEQAGVVAFWLIPFHLSFPFQFTLQRFLQCQLKTAIIAWVSGGALAIHVLVSWVFVEKMRIGIVGTALTIGFSWWLSVLGLLGYTIFGGCPHSWTGFSAEAFVGLWEFFKLSFASGVMVALENFYYRLLLIVSGYMHNTEIAIDALSVCVTIYGWESMIPLAFLAATGVRVANELGAGNAEGAKFATVVSVVNTVLVGFIFWLIIVVFNEQLALIFTSSSSVIQMVNELAILLAFTILLNCIQPVLSGVAVGCGSQAVVAYINVGSYYLVGIPLGILLGSLLPSGIVGMWTGMMSGTVVQTLILTLITMRYDWDKEVRKAQVLIIEEASPNR* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0985 479 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 467 - -
Apr5g0985 479 PANTHER PROTEIN DETOXIFICATION 19 467 - -
Apr5g0985 479 TIGRFAM matE: MATE efflux family protein 41 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr5g0985 479 Pfam MatE 263 423 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr5g0985 479 Pfam MatE 41 201 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr5g0985 479 CDD MATE_eukaryotic 31 466 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0985 Apr-Chr5 14417206 14421923 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0985 K03327 - gmx:100814869 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0985 5 14417206 14421923 Apr5g0985 5 14417206 14421923 ECH