Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0759 ATGCTCCGAATCCCCAAAATTTTCGCCGTCAACGTCCGTCACCCTAGCTTTCATCCCCTTCTGTCCGTTTCCGTCACGGTGTCCCCTCCTCCGTTACCAAAGGGAAAGCCAATGGCGTCTCGTGATTCGATGGTGGCAGAATACGCTAAATCAAACCGGTCGTCGTGCAAGGCGTGTTCCGAAGCCATCAAAGCGAAGACACTGCGGTTAGGTTTGGTTTCCAAAGGCGACGGTCCTTACAACGTCGTTAAATGGCACCATCTCCATTGCTTCCCTCTACCCTCTCACTCTCCCTCTTCTCCTGAGACCATCAATGGCTTTTCCACCTTGAAGAGTAGTGACCAGGAAAGTCTGAAGAAGTTATTTGCTGAAAATGACAAATCTGAAGAAAAGGTTCATAAAGCAAAGAGAGATGTACAAAATGAAACGCAAATGAGTGAAGAACCTAATTCAAAGGGAATGAAGTTGTGCACACCTGATGTTATTGCTATGGTGAACATCAACTTTTCAGTTTCTGATGTCACGAGCAAGTACAAGGATGCTACCCTTTTACCAAAATGGAAGGCGTTCCAAACTGTCATTTTTCTTGATCGGGATGATGGTCTGCATGATTCAACTAAAATTGCTGCTTTTGATTTCGATGGGTGTCTTGCAAAAACTGCACTGGCAAGAGTGGGTCCAAATGCTTGGTCCCTCATGCATTCGTCAATTCCTGATAGACTACAAAGCCTATACAATGATGGTTACAAGTTGGTAATTTTCACCAATGAATCCAATATTGAACGTTGGAAGAATAAGAGACAACTAGCTGTGGACTCTAAAGTTGGACGTCTAAATAATTTCATTGGGAAAGTGAAGGTTCCAATTCAGGTTTTTATAGCCTGTGGGCTAGGTAAATCAGGAGGTAAAACTATCCAAGAGGAAGATCCTTTTCGCAAACCCAAACCAGGGATGTGGCATCTTATGGAGAAACACTTCAACTCTGGCATTGTCATTGATATGGATCAATCCTTTTATGTTGGTGATGCAGCAGGGAGAGAATCAGATCACAGTGATGCTGATATTAAATTTGCAGAGGCCGTTGGTTTAAAATTTTATGTCCCGGAAGAGTACTTCGCCTGA 1122 0.4358 MLRIPKIFAVNVRHPSFHPLLSVSVTVSPPPLPKGKPMASRDSMVAEYAKSNRSSCKACSEAIKAKTLRLGLVSKGDGPYNVVKWHHLHCFPLPSHSPSSPETINGFSTLKSSDQESLKKLFAENDKSEEKVHKAKRDVQNETQMSEEPNSKGMKLCTPDVIAMVNINFSVSDVTSKYKDATLLPKWKAFQTVIFLDRDDGLHDSTKIAAFDFDGCLAKTALARVGPNAWSLMHSSIPDRLQSLYNDGYKLVIFTNESNIERWKNKRQLAVDSKVGRLNNFIGKVKVPIQVFIACGLGKSGGKTIQEEDPFRKPKPGMWHLMEKHFNSGIVIDMDQSFYVGDAAGRESDHSDADIKFAEAVGLKFYVPEEYFA* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0759 373 MobiDBLite consensus disorder prediction 123 143 - -
Apr5g0759 373 Gene3D - 185 373 IPR023214 -
Apr5g0759 373 CDD HAD_PNP 207 372 - -
Apr5g0759 373 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 44 126 IPR001510 GO:0003677|GO:0008270
Apr5g0759 373 PANTHER BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE 40 372 - -
Apr5g0759 373 TIGRFAM DNA-3'-Pase: DNA 3'-phosphatase 197 372 IPR006551 -
Apr5g0759 373 SMART zf_PARP_3 47 123 IPR001510 GO:0003677|GO:0008270
Apr5g0759 373 TIGRFAM HAD-SF-IIIA: HAD hydrolase, family IIIA 207 365 IPR006549 -
Apr5g0759 373 Coils Coil 118 145 - -
Apr5g0759 373 Gene3D - 38 146 IPR036957 GO:0003677|GO:0008270
Apr5g0759 373 SUPERFAMILY HAD-like 192 372 IPR036412 -
Apr5g0759 373 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 43 142 - -
Apr5g0759 373 Pfam Polynucleotide kinase 3 phosphatase 207 372 IPR013954 -
Apr5g0759 373 MobiDBLite consensus disorder prediction 123 152 - -
Apr5g0759 373 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 47 121 IPR001510 GO:0003677|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0759 K08073 - gmx:100796730 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0759 5 10616649 10626445 Apr5g0759 5 10616649 10626445 ECH