Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0750 ATGCGGTGTCTGAAAAGATCAAACTTTGATGTGTCTCAACTTCTTGCAGCAAAGAGAAGGAAAAAGGATAACACCATCAGCCTAGCAAACATTAGTTTTGATGAAGGTCAGAGGAAAGAAGAATATATAAAACCAGCACTCATCAAGTTTGAACAGGAGCATAAGAAAGATGAAATCATCAACTTTGGAAGTAGTAAATTTGATCAGGAGAGGAGTCAACTTGATCTTGCACGCATGATCATATTACATGGATACCCATTGACCTTGGTTGAACAAGTAGGATTCAAGGTCTTTGTGAAGAACCTCCAGCCTCTCTTTGAGTTTCTGCCTAACAGTGCTGTGGAGATTTCTTGTATAGAAATCTACAGGAGGGAGAAAGAGAAAGTGTATGACATGATAAACAAACTACATGGTAGGATTAATCTTTCTATTGAAATGTGGTCTTCAACTGAAAATACTTCGTATTTGTGTCTATCTGCACAGTATATTGATGAGGAATGGACACTACAAAAGAAAATCCTGAACTTTGTAACACTTGATTCTTCACATACTGAAGACTTACTTCCAGAAGTGATTATCAAATGTCTCGGTGAATGGGATATTGACTGCAAGCTTTTTGCCCTGACACTTGATGATTGTTCCATTGATGATGACATCACTCTTAGAATCAAAGAACGAGTTTCTGAGAAAAGGCCCTTTTTAAGTACTCGACAATTACTTGACATACGTTCCGCTGCACATCTTCTAAATTCCATTGTTCAAGATGCCACGGATGCTTTGCATGAGGTGATCCAAAAGATTAGAGAGAGCGTCAGATATATTAGAAGTTCACAATTAGTGCAAGGAAAATTTAATGAAAGTACTCAACATGCCGGGATTAACTCTCAAAAGATCTTATTTCTTGACTTTCCAGTTCATTGGAAGTCTACGTATCTCATGCTTGAGACTGCGCTAGAATACAGGAGTGCTTTTTCTCTCTTCCAAGAACATGATCCCTCTTATTCATCAGCTCTAACTGATGAAGAGTGGGAATGGGCTGGTTCTGTTACTGGATATTTAAAACTTTTAGTTGAAATTATGAATGTCTTTTCAGGCAACAAATTTCCTACAGCTAATATATATTTCCCTGAGATTTGTGATGTCCATATTCAATTAATTGATTGGTGCAGAAGTTCAGATGATTTTCTTAGTTCCATGGCCTCAAAGATGAAAGCCAAATTTGATAGGTACTGGAGCAAGTGCAGTTTGGCTTTAGCAGTAGCTGCTGTCCTAGATCCTCGGTTCAAAATGAAGTTGGTTGAGTACTACTACTCCCTGATTTATGGCAGTACTGCTTTGGAACGTATTAAGGAAGTTTCTGATGGTATCAAAGAACTATTTAATGCATATTCGATCTGTTCAACTATGATTGATCAAGGCTCAGCCTTGCCTGGTAGCAGTTTACCTAGTACAAGTTGTGGTTCCAGAGATAGACTAAAAGGCTTTGACAGATTCCTTCATGAGACATCACAGAGTCAGTCCATGACATCAGACTTAGACAAGTATTTAGAGGAACCAGTCTTTCCTCGTAATTCTGATTTTAACATATTGAACTGGTGGAAAGTCCACATGCCAAGGTACCCAATTTTGTCTATGATGGCACGTGATGTTCTTGGAACTCCAATGTCAACTTTGACACCAGAATTGGCATTTAGCACTGGGGGAAGAATGCTCGATTCTTCTCGTAGTTCACTAAACCCTGATACACGAGAGGCTTTAATATGCACGCAAGATTGGCTCCGAAATGAATCTGGAGAGCTAAATCCATCCCCAATTCTTTCTGCTCTACCCCTTCTCATCGAATGA 1845 0.3892 MRCLKRSNFDVSQLLAAKRRKKDNTISLANISFDEGQRKEEYIKPALIKFEQEHKKDEIINFGSSKFDQERSQLDLARMIILHGYPLTLVEQVGFKVFVKNLQPLFEFLPNSAVEISCIEIYRREKEKVYDMINKLHGRINLSIEMWSSTENTSYLCLSAQYIDEEWTLQKKILNFVTLDSSHTEDLLPEVIIKCLGEWDIDCKLFALTLDDCSIDDDITLRIKERVSEKRPFLSTRQLLDIRSAAHLLNSIVQDATDALHEVIQKIRESVRYIRSSQLVQGKFNESTQHAGINSQKILFLDFPVHWKSTYLMLETALEYRSAFSLFQEHDPSYSSALTDEEWEWAGSVTGYLKLLVEIMNVFSGNKFPTANIYFPEICDVHIQLIDWCRSSDDFLSSMASKMKAKFDRYWSKCSLALAVAAVLDPRFKMKLVEYYYSLIYGSTALERIKEVSDGIKELFNAYSICSTMIDQGSALPGSSLPSTSCGSRDRLKGFDRFLHETSQSQSMTSDLDKYLEEPVFPRNSDFNILNWWKVHMPRYPILSMMARDVLGTPMSTLTPELAFSTGGRMLDSSRSSLNPDTREALICTQDWLRNESGELNPSPILSALPLLIE* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0750 614 SUPERFAMILY Ribonuclease H-like 134 595 IPR012337 -
Apr5g0750 614 PANTHER BED FINGER-RELATED 1 597 IPR045259 -
Apr5g0750 614 Pfam Domain of unknown function (DUF4413) 364 463 IPR025525 GO:0003677
Apr5g0750 614 Pfam hAT family C-terminal dimerisation region 511 593 IPR008906 GO:0046983
Apr5g0750 614 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 1-LIKE 1 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0750 Apr-Chr5 10435186 10441398 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0750 - - gmx:106796315 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0750 5 10435186 10441398 Apr5g0750 5 10435186 10441398 ECH