Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0746 ATGTCTCTGTTTAATGCTTGTTCTATCTGTGAAGTTGGCAAGGATGCAGCTGGAGTTGCTGGGAACATCTTTGCTTTTGGGTTGTTTGTATCCCCCATACCCACATTTAGGAGAATTATCAGAAATGGGTCAACAGAAATGTTCTCAGGGTTGCCATATGTTTACTCTCTTTTGAACTGCTTGATCTGTTTGTGGTATGGTACACCTCTGATATCACCTGATAATGTGTTGGTTACGACTGTTAATTCAATTGGAGCTGTCTTTCAGCTTGTGTACATAATCCTCTTCTTGATGTATGCTGAAAAAGCAAGAAAGGTGAGAATGCTTGGATTATTGCTGGCAGTAGTGGGCATATTTGTGATCATATTAGTTGGGAGCTTGCAAATGGAGGACATCACAATGCGCAGGATGTTTGTGGGATTCTTGAGTTGTGCTTCTCTCATTTCAATGTTTGCCTCACCATTGTTTATAATTAAATTGGTCATTCGGACAAAGAGTGTTGAGTTTATGCCATTTTATCTTTCACTTTCCACATTCCTAATGAGTGCCTCCTTCTTTCTTTATGGATTGGTCAGTAATGATGCCTTTATATATGTACCAAATGGGATAGGAACTGTTTTAGGAATGGTACAATTGGTATTATACTTCTATTTCAAGAGTTCATCCAGAGAAGACTCCAGAGAACCCTTGATAGTGTCGTATGAATGA 708 0.3898 MSLFNACSICEVGKDAAGVAGNIFAFGLFVSPIPTFRRIIRNGSTEMFSGLPYVYSLLNCLICLWYGTPLISPDNVLVTTVNSIGAVFQLVYIILFLMYAEKARKVRMLGLLLAVVGIFVIILVGSLQMEDITMRRMFVGFLSCASLISMFASPLFIIKLVIRTKSVEFMPFYLSLSTFLMSASFFLYGLVSNDAFIYVPNGIGTVLGMVQLVLYFYFKSSSREDSREPLIVSYE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0746 235 Pfam Sugar efflux transporter for intercellular exchange 138 221 IPR004316 GO:0016021
Apr5g0746 235 Pfam Sugar efflux transporter for intercellular exchange 18 103 IPR004316 GO:0016021
Apr5g0746 235 Gene3D - 13 106 - -
Apr5g0746 235 PANTHER RAG1-ACTIVATING PROTEIN 1 11 234 - -
Apr5g0746 235 Gene3D - 137 229 - -
Apr5g0746 235 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET2 11 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0746 Apr-Chr5 10339477 10343009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0746 4 234 Miscellaneous Gene Families AT3G14770 69.099 3.50e-112 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0746 K15382 - gmx:100790469 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0502 2 5828546 5830841 Apr5g0746 5 10339477 10343009 ECH
Apr5g0746 5 10339477 10343009 Apr5g0746 5 10339477 10343009 ECH