Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0716 ATGAGTGAGAGTAACGGGAACAGCAGGAGGCTTAAGGAGGATCAAGATCTGGGACTGTACTTCTTGGAGGCATGTCGGCGCAGGGAGATGAAAGAGAAAGAGAAAGAGAAAGAGGAAGAGGAAGAGGAGGAGGAGGCACCAAGCGAGCTGAACACAATTAACAGCTCCGGTGGTTTTGTGCTGGTGTCCACAGACAAGCTGTCAGTGAAGTACACCAGCGTCAACCTTCACGGCCACGACGTCGGTGTCATTCAGGCCAACAAGCCTGCTCCTACCAAACGCCTCATTTACTATTTCGAGATTAACGTCAAAGATGCCGGCGTTAAGGGCCAGATTGCCATCGGCTTCACCTCCGAGACCTTCAAGATGCGAAGACAACCAGGGTGGGAGGCCAACAGTTGCGGCTATCACGGTGACGATGGTTTGCTTTATCGTGGCCACGGCAAGGGAGAAGCCTTTGGACCAACCTATACATCCGGTGATGTAGTCGGTGCTGGAATCAACTATGCCGCACAGGAATTCTTTTTCACTAAGAATGGCCAAGTTGTCGGCTCAGTTTACAAAGACATGAAGGGTCCCCTTTTTCCAACCATTGCTGTTCATAGCCAAAATGAAGAGGTGTATGTCAACTTTGGGCAGAAACCGTTTACTTTTGACCTAAAGGAATTTGAAGCACAAGAAAGAATGAAGCAGCAACTGAAAATAGAGGAAATTTCTGTGCCACCAAATGTCAGTTACGGAATTGTCCGCTCCTACCTGCTGCACTATGGCTATGAAGATACATTGAATTCATTTGATGTGGCTAGTAAGAGTACTGTTCCTCCTATATACATAGCTCAAGAAAATGGAATTGATGAGCAGGAAATAACATATGCATTAAATCACAGAAAGACTCTGCGGCAGCTAATCAGGAATGGGGAGATTGATGTTGCATTTGGTAAACTGCGTGAATGGTATCCACAGATTGTTGAGGAGAATACATCAGCTACGTGTTTTCTGCTTCATTGTCAAAAATTCATCGAATTAGTTGGAGCACTGGAGGAGGCTGTCAAATATGGAAGGATAGAATTGTCGAGTTTTTTTGGGTTGCCTGTCTTTGAGGATTTAGTTCAGGACTGTGTTGCTTTGCTGGCATATGAGCGACCTTTGGACTCCCCCGTAGGCTATCTTCTAAAAGACTCGCAGCGTGAAGTTGTAGCTGACACAGTAAATGCCATGATATTATTAACAAATCCCAATATGAAGGAATCAAAACATTGCTTGCACTCTTATCTTGAGAGGTTGCTTAGACAGCTCACTGCGTGCTGCTTGGAGAGACGATCATTGAATGGAGAGCAGGGGGAAGCTTTCCAACTTCAGAGAGTGCTTAGCAGTAGTAGAAGAGGCTAA 1389 0.4579 MSESNGNSRRLKEDQDLGLYFLEACRRREMKEKEKEKEEEEEEEEAPSELNTINSSGGFVLVSTDKLSVKYTSVNLHGHDVGVIQANKPAPTKRLIYYFEINVKDAGVKGQIAIGFTSETFKMRRQPGWEANSCGYHGDDGLLYRGHGKGEAFGPTYTSGDVVGAGINYAAQEFFFTKNGQVVGSVYKDMKGPLFPTIAVHSQNEEVYVNFGQKPFTFDLKEFEAQERMKQQLKIEEISVPPNVSYGIVRSYLLHYGYEDTLNSFDVASKSTVPPIYIAQENGIDEQEITYALNHRKTLRQLIRNGEIDVAFGKLREWYPQIVEENTSATCFLLHCQKFIELVGALEEAVKYGRIELSSFFGLPVFEDLVQDCVALLAYERPLDSPVGYLLKDSQREVVADTVNAMILLTNPNMKESKHCLHSYLERLLRQLTACCLERRSLNGEQGEAFQLQRVLSSSRRG* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0716 462 Coils Coil 21 46 - -
Apr5g0716 462 ProSiteProfiles B30.2/SPRY domain profile. 28 216 IPR001870 -
Apr5g0716 462 PANTHER RAN-BINDING PROTEIN M HOMOLOG 31 459 - -
Apr5g0716 462 SMART ctlh 292 350 IPR006595 -
Apr5g0716 462 MobiDBLite consensus disorder prediction 30 52 - -
Apr5g0716 462 PANTHER RAN BINDING PROTEIN 9-RELATED 31 459 - -
Apr5g0716 462 Pfam SPRY domain 96 213 IPR003877 GO:0005515
Apr5g0716 462 SUPERFAMILY Concanavalin A-like lectins/glucanases 54 218 IPR013320 -
Apr5g0716 462 SMART SPRY_3 94 215 IPR003877 GO:0005515
Apr5g0716 462 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 292 350 IPR006595 -
Apr5g0716 462 SMART toby_final6 344 445 IPR013144 -
Apr5g0716 462 Gene3D - 25 232 IPR043136 -
Apr5g0716 462 CDD SPRY_RanBP_like 82 212 IPR044736 -
Apr5g0716 462 Pfam CTLH/CRA C-terminal to LisH motif domain 294 434 IPR024964 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0716 K23334 - gmx:100805319 842.802