Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0708 ATGAATGTTTTAGGGCTGAGTCTGGTGTTAGCTTCACTCGCTGCAGCGGGCATTTTCTCTCCAAGTGCCACCCCAGACACGCAGCAGCAGCAGAAGCAAGGAGCGAGCACCATTTTCAAAGAAGGCCACAGAGTTGTGGTTGTTGAATACGACCAAGATGGCCATCAGAACACAAAAATCTCAATCTCTCCAGAACAACCCACCCATCATGACGCAAAAGAGCTCATTTGCGATGCCTATGGAAAATGCAAGCACAAGATAGCCGACGCAATGGACAAGACCAAGGACAAGGCTCAAGAGGCCATCCACAAGAAGAAGGATATGATTGCTGCCAACAAGGAGGCTGCACGCCAAGTTGGTGACACTGTTGCCGATGCACTTGGAAAGGCTAAGGAAACGGTGTATGATAAAGCCCATGATGTCCAGGAACACACCAAAGAGACTGCAGAAATATTAAAGGAGCATATAGTTAATAACATTTCAGAAGCTAGGGACACTTTGCGGGACGCCAAAGACGCAATGAAGCGTGTTGCGTGCAGTTTAGGATCCATGGAGACCCTCGGTTCTGTGATGGGGGTGGCTAGTTTGCTGGGGTTTGCCACGGCTTATGGGATGTGTGTGTGGATTACGTTTATCTCCAGCTATGTGTTGGCCAGGGCTATGCCAAGGCAACAATTTGCAGTGGTGCAGAGTAAAATTTACCCCGTTTATTTCCGGGTTATGGCTTATAGTATTGGGATCGCTTTGTTGGGCCATGTCTTAGGCCATCCAAAGAGACTGCTTCTCAACAAGGCTGAAGCATTGCAAGCTTATAACCTTTTGGCCTCGCTTTTCACTGTTTTCGTCAATTCTCTTTACTTGGAGCCTCGGGCCACTAAGTTGATGTTCGAAAGGATAAAAATAGAAAAAGAAGAAGGAAGAGGCAGAACGGATCTGAGGGGTGAAGGTAGTAGAACGGAAGAGCCTCAGCAAGCAGCTGATCCTAAAGAACCTTCCACAACCACGCAGAGGACAGATGAGGATGCAGTGAGATCAAGGATAATCAAGCTGAATGACAAACTGAAGAAATTGAATTCATATTCCTCACTCCTAAATATCCTCAATCTCATGTCTCTTACTTGGCATCTGGTTCATTTGGCACACCGTGTTCACCGTACTTGCTAA 1164 0.4691 MNVLGLSLVLASLAAAGIFSPSATPDTQQQQKQGASTIFKEGHRVVVVEYDQDGHQNTKISISPEQPTHHDAKELICDAYGKCKHKIADAMDKTKDKAQEAIHKKKDMIAANKEAARQVGDTVADALGKAKETVYDKAHDVQEHTKETAEILKEHIVNNISEARDTLRDAKDAMKRVACSLGSMETLGSVMGVASLLGFATAYGMCVWITFISSYVLARAMPRQQFAVVQSKIYPVYFRVMAYSIGIALLGHVLGHPKRLLLNKAEALQAYNLLASLFTVFVNSLYLEPRATKLMFERIKIEKEEGRGRTDLRGEGSRTEEPQQAADPKEPSTTTQRTDEDAVRSRIIKLNDKLKKLNSYSSLLNILNLMSLTWHLVHLAHRVHRTC* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0708 387 Gene3D Helix hairpin bin 68 187 - -
Apr5g0708 387 Pfam Domain of unknown function (DUF4149) 198 298 IPR025423 -
Apr5g0708 387 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN 70 178 - -
Apr5g0708 387 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN 163 387 - -
Apr5g0708 387 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN 1 67 - -
Apr5g0708 387 MobiDBLite consensus disorder prediction 307 342 - -
Apr5g0708 387 Coils Coil 153 173 - -
Apr5g0708 387 MobiDBLite consensus disorder prediction 307 325 - -
Apr5g0708 387 PANTHER - 70 178 - -
Apr5g0708 387 PANTHER - 163 387 - -
Apr5g0708 387 PANTHER - 1 67 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0708 - - lja:Lj3g3v3754400.1 425.631