Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0703 ATGGCCGACAGTGGTTCCAACCCTACCCCTTCTCCTCCTCCACCGCCCGCTGACACCGCTCCACCGCCACAACAACTTGATTTGCCCACTGCCTTAGCTGCAGAACCCGAACCCGAACCCGAACCCAAACCCAAACCCCCTGTTACTGACAACAAGGAGCCCGATAACACTTGCGAGGAGGATGTGGTAGTGGTTGAAGAGAAAGAGAAAGAAGAAGAAAAAGAGGAGCGGAAGATTCCGCAAAGCTTAGAGTCGTTCAAGGAGGAGAGCAATAGGGTTTGTGATCTGTCGGAATCGGAGAGAAAGAGTGTGGAGGAGCTGAAGGAGATGCTGAGGGAGGAGCTGAAAGCGGAAGGAGAAGTTTCGATTTGGGGTGTTCCTCTGCTGAAGGACGAAAGAACCGATGTGATTCTTCTGAAGTTTCTGAGAGCCCGAGAGTTCAGAGTGAAGGACGCTCTTTTCATGATCAAGAACACTCTCCGCTGGAGGAAGGACTTCAACATGGACGCTCTCTTAGATGAAGATCTGGGTGATGATTTGGATAAGGTTGTGTTCATGCACGGACATTCCAGACAGGAGCACCCTGTCTGTTACAACGTCTATGGAGAGTTCCAGAACAAGGACCTTTATCGCAAGGCATTCTCCACGGAACAAGCTCGCACCAACTTTCTCCGTTGGAGGATTCAGTTCTTGGAGAGGAGCATTAGAAAGCTGGACTTCTCTCCCGGAGGCATTAACACCATTTTCCAAGTGAATGATCTTAAAAATTCTCCAGGCCCTGCCAAACGCGAACTTCGCCTTGCCACCAAACAAGCCTTGCAGTTGCTTCAGGACAATTATCCCGAATTTGTTGCCAAACAGGTTTTTATCAATGTTCCCTGGTGGTACCTTGCTTTCTACACCATGCTCAATCCCTTCCTCACTCAGAGGACCAAAAGCAAATTTGTCTTTGCAGGCCCTTCCAAGTCTCCCGATACTCTTTTCAAGTACATTTCTCCGGAGCAAGTGCCGATTCAGTATGGTGGCCTCAGTGTAGACTTTTGTGACTGCAACCCAGATTTCAGTGTGTCTGATCCTGTCACGGAAATTCCCATCAAGCCAACCACAAAGCAAACTGTGGAAATTGCTATTTATGAGAAATGCATTATTGTTTGGGAGCTGCGGGTGGTGGGCTGGGAGGTCAGTTATGGTGCTGAGTTCAAGCCCGATGCTACAGATGGATATACTGTTATCATACAGAAGGCTGCCAAGATGTCACCCACCGATGAACCCGTGGTTTCCAATAGCTTTAAAGTTGGTGAACTAGGCAAATTATTGCTCACTGTCGACAATCCTACCACCAAGAAAAAGAGGCTTCTTTACAGGTTCAAGATCAAACCTTATTCTGATTGA 1392 0.482 MADSGSNPTPSPPPPPADTAPPPQQLDLPTALAAEPEPEPEPKPKPPVTDNKEPDNTCEEDVVVVEEKEKEEEKEERKIPQSLESFKEESNRVCDLSESERKSVEELKEMLREELKAEGEVSIWGVPLLKDERTDVILLKFLRAREFRVKDALFMIKNTLRWRKDFNMDALLDEDLGDDLDKVVFMHGHSRQEHPVCYNVYGEFQNKDLYRKAFSTEQARTNFLRWRIQFLERSIRKLDFSPGGINTIFQVNDLKNSPGPAKRELRLATKQALQLLQDNYPEFVAKQVFINVPWWYLAFYTMLNPFLTQRTKSKFVFAGPSKSPDTLFKYISPEQVPIQYGGLSVDFCDCNPDFSVSDPVTEIPIKPTTKQTVEIAIYEKCIIVWELRVVGWEVSYGAEFKPDATDGYTVIIQKAAKMSPTDEPVVSNSFKVGELGKLLLTVDNPTTKKKRLLYRFKIKPYSD* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0703 463 PRINTS Cellular retinaldehyde-binding protein signature 137 159 - -
Apr5g0703 463 PRINTS Cellular retinaldehyde-binding protein signature 300 319 - -
Apr5g0703 463 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 173 342 IPR001251 -
Apr5g0703 463 PANTHER PATELLIN-3 36 117 - -
Apr5g0703 463 PANTHER PATELLIN-3 116 463 - -
Apr5g0703 463 Gene3D - 89 376 IPR036865 -
Apr5g0703 463 Pfam CRAL/TRIO, N-terminal domain 105 158 IPR011074 -
Apr5g0703 463 MobiDBLite consensus disorder prediction 7 23 - -
Apr5g0703 463 CDD SEC14 182 343 IPR001251 -
Apr5g0703 463 SUPERFAMILY CRAL/TRIO N-terminal domain 85 175 IPR036273 -
Apr5g0703 463 SUPERFAMILY CRAL/TRIO domain 183 351 IPR036865 -
Apr5g0703 463 MobiDBLite consensus disorder prediction 38 81 - -
Apr5g0703 463 SMART CRAL_TRIO_N_2 134 159 IPR011074 -
Apr5g0703 463 Coils Coil 94 114 - -
Apr5g0703 463 Pfam CRAL/TRIO domain 183 342 IPR001251 -
Apr5g0703 463 PANTHER PATELLIN-1 116 463 IPR044834 GO:0008289
Apr5g0703 463 PANTHER PATELLIN-1 36 117 IPR044834 GO:0008289
Apr5g0703 463 MobiDBLite consensus disorder prediction 1 81 - -
Apr5g0703 463 SMART sec14_4 178 345 IPR001251 -
Apr5g0703 463 ProSiteProfiles GOLD domain profile. 353 458 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0703 Apr-Chr5 9588551 9590970 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0703 138 337 Acyl Lipid Metabolism Gene Families AT5G47730 26.540 2.38e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0703 - - gmx:100804006 645.966