Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0700 ATGGCGAGAAATGTGATGCACGCGGTTCAGTACGACGCCTATGGGGGAGGATCCAATGGCTTGAAGCACGTTGAAGTTAACGTTCCGACTCCAGAGCCAGACCAAGTTTTACTGAAACTTGAAGCAATTAGCATAAACCCGATCGATTGGACGATTCAGAAAGGCCTTCTGCGCCCTTTGTTTCTTCCAAGAAGCTTTCCCCACATACCTTGCACTGATGTCGCCGGAGAGATAGTTGAGATTGGCACGCAAGTCAAAGATTTTCAAGTTGGCGTCAAAGTCGTTGCCAAACTCACTCATCAATATGGAGGTGGACTGGCTGAGTTTGCTGTGGCTAGTGAGAGCTTAACAGCTGCCAGACCGTCTGAAGTCTCGGCTGCTGAAGCTGCGGGTTTACCCATCGCTGGTCTCACTGCTCGTGATGCCCTCACTCAAGTTGCAGGAGTCAAGCTTGATGAGACTGGCGAGCCCAAGAACGTTTTAGTAACTGCTGCTTCAGGTGGTGTAGGTCACTATGCTGTTCAACTGGCAAAACTAGGGAACAACCATGTCACAGCCACTTGTGGGGCTCGCAACATTGACTTTGTTAAGGGCTTAGGCGCAGATGAGGTTCTTGACTACAGGACCCCAGAGGGGGCAGCACTGAGGAGTCCATCTGGTAGGAAATATGATGCAGTGATACATTGTACATCTGGAATACCCTGGTCAACTTTTGATTCTAATCTGAGTGAAAAAGGGGTGGTAGTTGATTTAACACCCACCCCAAAAACATTTTTGACTTTTGCTCTGAAGAAACTTACTTTTTCTAAGAAGCAGCTGGTGCCATATTTCGTAAATGTCAAGCGTGAAGGCCTGGATCATCTAGTTCAATTATTGAAAGATGGAAAACTTAAGTCTGTAATTGACTCTAAGTTTCCTTTGAGCAAAGCTGAAGATGCTTGGGCTAAGAGCATTGATGGCCACGCTACTGGAAAAATTATTGTGGAGCCATAG 993 0.4683 MARNVMHAVQYDAYGGGSNGLKHVEVNVPTPEPDQVLLKLEAISINPIDWTIQKGLLRPLFLPRSFPHIPCTDVAGEIVEIGTQVKDFQVGVKVVAKLTHQYGGGLAEFAVASESLTAARPSEVSAAEAAGLPIAGLTARDALTQVAGVKLDETGEPKNVLVTAASGGVGHYAVQLAKLGNNHVTATCGARNIDFVKGLGADEVLDYRTPEGAALRSPSGRKYDAVIHCTSGIPWSTFDSNLSEKGVVVDLTPTPKTFLTFALKKLTFSKKQLVPYFVNVKREGLDHLVQLLKDGKLKSVIDSKFPLSKAEDAWAKSIDGHATGKIIVEP* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0700 330 SUPERFAMILY GroES-like 5 149 IPR011032 -
Apr5g0700 330 SMART PKS_ER_names_mod 16 328 IPR020843 GO:0016491
Apr5g0700 330 CDD MDR1 9 328 - -
Apr5g0700 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 124 279 IPR036291 -
Apr5g0700 330 PANTHER ZINC-BINDING DEHYDROGENASE FAMILY OXIDOREDUCTASE 4 330 - -
Apr5g0700 330 Gene3D - 13 328 - -
Apr5g0700 330 Pfam Alcohol dehydrogenase GroES-like domain 33 101 IPR013154 -
Apr5g0700 330 PANTHER ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE PROTEIN C16A3.02C 4 330 - -
Apr5g0700 330 Pfam Zinc-binding dehydrogenase 199 328 - -
Apr5g0700 330 Gene3D - 143 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0700 Apr-Chr5 9550524 9552644 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0700 K00224 - gmx:100790762 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0700 5 9550524 9552644 Apr5g0700 5 9550524 9552644 ECH