Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0690 ATGGCATCGGCTCTGAACAAGTTGAAATGGTTGAGCGGAGGCAGAGGCGGAGCATATGGCAGTGGATGGTGGAGTTATGCAACGGCAGCGGTGGGTGAGAAAGTGGGCGAGGAGGTTCCGAGTTCGGGAATTTGTAGGCCTCTCTCTGAAATACTGAAGGAGCTCAACAAGAAGGTCCCCGACTCCCTCGTCAAAACCCGCCACGAAAAGGATGGCTTCCCCGTCAGATACATTCCCTGGCATGTTGTGAACCGCATTTTGAACTTACACGCTCCTGAGTGGTCTGGTGAGGTTCGCAATATCACATATTCATCTGATGCCAAGTCTGTCTCTGTTGTCTACCGAGTTACCCTTTATGGGACTGATGCTGAGATATTTAGGGAATCAACAGGTACTGCTTCGGTAGATGACACAAGTTATGGAGATCCTGTACAGAAGGCAGAAGCGATGGCTTTTCGTAGAGCTTGTGCACGATTTGGGCTGGGCCTCCACCTTTATCATGAAGACGCATCATGA 516 0.5039 MASALNKLKWLSGGRGGAYGSGWWSYATAAVGEKVGEEVPSSGICRPLSEILKELNKKVPDSLVKTRHEKDGFPVRYIPWHVVNRILNLHAPEWSGEVRNITYSSDAKSVSVVYRVTLYGTDAEIFRESTGTASVDDTSYGDPVQKAEAMAFRRACARFGLGLHLYHEDAS* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0690 171 PANTHER DNA REPAIR RAD52-LIKE PROTEIN 1, MITOCHONDRIAL 34 170 - -
Apr5g0690 171 Gene3D DNA repair protein Rad52/59/22 46 171 IPR042525 -
Apr5g0690 171 Pfam Rad52/22 family double-strand break repair protein 49 169 IPR041247 -
Apr5g0690 171 PANTHER - 34 170 IPR037489 GO:0000724|GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0690 Apr-Chr5 9416875 9418925 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0690 - - gmx:100782719 257.684