Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0674 ATGAGCATTCATCGAACGCGGTTGCCACTGTCGATCACCAAGCTCCTCTTCTGGTCGCTCATGTTGCTAAGCTTGATCGTCCTGCTATTGTTGGGATCTCCTCCGTCGTCCGCTTCCCATTCCCATTCCCGGCGATCCCTCCGCGGCGGAGCTCACTGGGAGACATCCGTTCGCGAATCTGCCACCCCTCGTCCTCCCTCTAAATCCAAACCCCTAACGGTCCTCGTCACCGGTGCAGCCGGTTTTGTTGGGACCCACGTCTCCATTGCTCTCAAACTCCGGGGAGACGGCGTCGTGGGCATTGACAACTACAACCGCTACTACGACCCCTCCCTGAAGCGTGCACGGACGCAGCTTCTCGCGCGTCACGGCGTCTTCGTGGTGGAGGGAGACATAAACGACGGCGCTCTCATGAGGTCTCTCTTCAAATTAGTGAAATTCACGCACGTGATGCACCTGGCGGCCCAGGCTGGGGTACGCTACGCGATGAAGAACCCTTCCTCTTACATTCACAGCAACATTGCGGGCCTCGTGAGCGTTTTCGAGGCCTGCAAGTCGGCGAACCCTCAACCCGCTATCGTGTGGGCCTCCTCGAGTTCCGTTTACGGCCTCAATTCGAAGGTGCCGTTCTCGGAGCGGGACCGGACGGACAAGCCGGCCAGCCTGTATGCTGCGACCAAGAAGGCCGGCGAGGAAATTGCGCACACTTATAACCATATTTATGGACTTTCCATTACTGGGTTGCGCTTCTTCACCGTTTATGGGCCTTGGGGCCGGCCCGATATGGCGTATTTCTTCTTCACTAAAGATATATTGAAAGGGAAACAGATAGGTATCTTCGAGGGTCCTCACGGTGGTTCCGTGGCCAGGGACTTCACTTACATTGATGATATTGTGAAGGGTTGCTTGGGGGCTTTGGACACTGCTAAGAAGAGTACTGGGAGTGGGGGCAAGAAGAATGGGCCCGCCCAGTTACGCGTTTACAATCTGGGCAACACTTCGCCCGTCCCCGTCGCCAAGCTTGTCAGCATTCTCGAGAAGTTGCTCAAGGTGCCTTCTAAGAAGAAACTGTTGCCCATACCTGCAAACGGCGACGTCGTTTTTACGCATGCCAATATTAGCTTGGCCAGGAAGGAGATCGGCTACAAGCCCGCCACTGATTTGGAAACGGGTTTGAAGACATTTGTTGATTGGTATATGGATTATTATTCTCCCTCTTCGGAGAAAAGTGCTGCTAGTGCCTGGTAA 1248 0.5473 MSIHRTRLPLSITKLLFWSLMLLSLIVLLLLGSPPSSASHSHSRRSLRGGAHWETSVRESATPRPPSKSKPLTVLVTGAAGFVGTHVSIALKLRGDGVVGIDNYNRYYDPSLKRARTQLLARHGVFVVEGDINDGALMRSLFKLVKFTHVMHLAAQAGVRYAMKNPSSYIHSNIAGLVSVFEACKSANPQPAIVWASSSSVYGLNSKVPFSERDRTDKPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDILKGKQIGIFEGPHGGSVARDFTYIDDIVKGCLGALDTAKKSTGSGGKKNGPAQLRVYNLGNTSPVPVAKLVSILEKLLKVPSKKKLLPIPANGDVVFTHANISLARKEIGYKPATDLETGLKTFVDWYMDYYSPSSEKSAASAW* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0674 415 PANTHER UDP-GLUCURONATE 4-EPIMERASE 4 4 409 - -
Apr5g0674 415 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 69 403 IPR036291 -
Apr5g0674 415 Gene3D - 72 404 - -
Apr5g0674 415 MobiDBLite consensus disorder prediction 36 70 - -
Apr5g0674 415 Pfam NAD dependent epimerase/dehydratase family 74 311 IPR001509 -
Apr5g0674 415 PRINTS Nucleotide sugar epimerase signature 100 116 - -
Apr5g0674 415 PRINTS Nucleotide sugar epimerase signature 290 305 - -
Apr5g0674 415 PRINTS Nucleotide sugar epimerase signature 325 340 - -
Apr5g0674 415 PRINTS Nucleotide sugar epimerase signature 365 382 - -
Apr5g0674 415 PANTHER EPIMERASE-RELATED 4 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0674 Apr-Chr5 9230892 9232919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0674 3 404 Miscellaneous Gene Families AT4G00110 73.399 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0674 K08679 - gmx:100819586 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0674 5 9230892 9232919 Apr5g0674 5 9230892 9232919 ECH