Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0663 ATGATGGTGATCGCTTCAACGGTTAGGGGAGTTTCGCTTAACTATGCAGAAGCCTTAACAAAGAGCATTTTGTTTTTTGAAGGCCAGAGGTCTGGCAAGTTGCCACCTTCTCAACGCATGACATGGCGGAAAGACTCTGCACTTCGTGATGGCTCCGATATTCAGATAAACATGGTAGGTGGATACTATGACGCTGGCGACAATGTCAAATTCCATTTCCCTATGGCATTCACAACGACCATGCTAGCTTGGAGTGTGGTAGAATTTGGAGATCTCATGGATTTAGAGCTGCAACATGCATTGGAAGCAATCCGGTGGGGAACTGATTATTTCCTTAAAGCCACAGAAAAGCCTAATAGAATTGTAGCACAAGTTGGCAATCCTATTGGTGATCATGGCTGTTGGGAGAGGCCAGAAGACATGGACACTCCTCGAACCTCATATGTCATCTCTCCAACAAAGCCAGGTTCAGAAGTCTCATCTGAGGTTGCAGCAGCACTTGCAGCATCTTCCATCGCATTTAGGACAACTGATTCCACCTACTCCAAGTTGCTTCTCAATAGGGCTGTGCAGGTGTTTAACTTTGCAAATAAATATCGTGGATCTTACAATGATAGCATAGGTGAGGCAGCATGCCCGTTCTACTGTGATTTCGATGGCTACATGGACGACTTGATTTGGGGAGCAGCATGGTTGTATAAAGCGACCGGTGTATCAAACTATTGGAATTTTGTAAAAGAAAACATCCAATCCCTGAGCGGTAGTTTTGCTGAATTTGGATGGGACTCCAAGAACGCTGGCATAAATGTGCTTGTTTCGCAATGGGTGCTGGCTGATCCACGCGATGCGAGTCCTTTCGTTCCCAATGCAGATAGATTTATATGCTCTTTGTTGCCGAATTCACCATTCAAATCAGTTTGGTACTCTAAAGGTGGGCTTCTATTCAAACTTGGATCAAGTAACCTACAACACACAACAGCATTGTCTTTTCTTGTAGTTGTTTATGCACGCTACATGCATGCTGCGAAAAAAGTAATAACCTGTGGAAATGAAGCTGCAGACCCACCCAGGCTCATAAATCTTGCAAAAAGTCAGGTGGATTACATATTAGGAAAGAACCCACTAGGGATGTCATACATGGTGGGATATGGGGCGAAGTTTCCTCAGAAGATACACCATCGTGGCTCAACATTGCCTTCTTTGAGTGCGCACCCACAACACCTTGGGTGTCGTGATGGAGACCATTATTTCGCAACAACAAAGCCTAATCCTAACATCTTAACAGGGGCTGTGGTTGGAGGCCCTGCGGAAGACGATTCTTTTGAGGACTCGCGCTATAATGTTGGCCAATCGGAGCCAACCACATACATCAATGCTCCTTTTGTTGGTGTTTTGGCTTACTTCAATAAAAAACATGCTAATAACACCTTCTTGTAA 1437 0.4468 MMVIASTVRGVSLNYAEALTKSILFFEGQRSGKLPPSQRMTWRKDSALRDGSDIQINMVGGYYDAGDNVKFHFPMAFTTTMLAWSVVEFGDLMDLELQHALEAIRWGTDYFLKATEKPNRIVAQVGNPIGDHGCWERPEDMDTPRTSYVISPTKPGSEVSSEVAAALAASSIAFRTTDSTYSKLLLNRAVQVFNFANKYRGSYNDSIGEAACPFYCDFDGYMDDLIWGAAWLYKATGVSNYWNFVKENIQSLSGSFAEFGWDSKNAGINVLVSQWVLADPRDASPFVPNADRFICSLLPNSPFKSVWYSKGGLLFKLGSSNLQHTTALSFLVVVYARYMHAAKKVITCGNEAADPPRLINLAKSQVDYILGKNPLGMSYMVGYGAKFPQKIHHRGSTLPSLSAHPQHLGCRDGDHYFATTKPNPNILTGAVVGGPAEDDSFEDSRYNVGQSEPTTYINAPFVGVLAYFNKKHANNTFL* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0663 478 SUPERFAMILY Six-hairpin glycosidases 14 475 IPR008928 GO:0005975
Apr5g0663 478 PANTHER ENDOGLUCANASE 2 472 - -
Apr5g0663 478 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 368 394 IPR018221 -
Apr5g0663 478 Pfam Glycosyl hydrolase family 9 15 465 IPR001701 GO:0004553|GO:0005975
Apr5g0663 478 PANTHER ENDO-1,4-BETA-GLUCANASE 2 472 - -
Apr5g0663 478 Gene3D - 11 477 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0663 Apr-Chr5 9141471 9144688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0663 1 469 Glycoside Hydrolase AT1G70710 58.051 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0663 K01179 - gmx:100814370 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0663 5 9141471 9144688 Apr5g0663 5 9141471 9144688 ECH