Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0662 ATGGGTTTCACGCAAAGGTTACTGATGATATTGGTCGGTACCATATTGATTGTAACGGATAGAGGCACGGGTACATGGCAGCATAACTATGGAGATGCATTGTCAAAGAGCATCTTGTTCTTTGAAGGACAGAGGTCAGGGAAGTTGCCACCAACACAGAGAATGACTTGGAGGAAGGATTCAGCGCTTCAAGATGGCTTTCTAGTTCCTAATACTTCTGTTGACTTGGTTGGTGGTTACTACGATGCTGGTGACAACGTGAAATTCAACTTTCCAATGGCATTCTCAACAACCATGCTGGCCTGGAGCGTAATAGAGTTCGGAAAATTCATGGGCCCAGACCTTAATCATGCACTAGACGCTATCCGTTGGGCCACAGATTATTTCCTTAAAGCCACAGCCATTCCTGGGTTTGTGTTTGCACAAGTTGGTGACCCATATGCTGATCATAATTGTTGGGAGAGACCAGAAGACATGGACACCCCCAGAATAGCCTATGCTGTAAGCAAGGAGTACCCTGGCTCTGAAGTTTCGGCAGAGATAGCAGCAGCACTTGCAGCCTCTTCAATTGTATATAGAAAATATCATGTTGGTTATTCTTCAAGACTACTCCAAAGGGCTATAATGGTTTTTGATTTTGCAGATAGATACAGAGGATCATATAATGACAGTCTCGGACGGTGGGTATGCCCATTCTATTGTGATTTTGGTGGCTACCAGGATGAATTGGTCTGGGGAGCAGCATGGTTGTTCAAGGCTACTAAGCTCCCTTATTACTTGGATTACATTAACCAAAACATTCATAATCTTGAAAACTTTGGTGAATTTGGGTGGGACTCAAAAGATGCTGGCATCAACGTGCTCGTTTCTAAGCTTCTGATTAATAGTAGATCTAATTCTAAGCCTTTCATACTCAATGCGGACAAGTTTGTTTGTGCTGTTCTACCTGAATCACCTTCAGTATCAGTCTCCTATTCTCCAGGTGGGCTTCTATTCAAGCCTGGGGGGAGTAACTTGCAGCACGCAACAACATTCTCATTTCTGTTTCTGGTTTATGCTGGCTATTTGAAAAAGGCAAATAAAGAAATTGACTGTGGCGGTGAAGTTTTTGCTTCTCCAAGGCGACTCAGACAAGTAGCAAGAGGCCAGGTAGATTACATACTAGGAAGAAACCCGTTGAATATGTCATACATGGTAGGATACGGACCAAAATTTCCTCAGAGAATTCATCATCGTGCGTCGTCATTGCCTTCCATGGTTCAGCACCCTAAGCACATCGATTGCAAAGAAGGATCCCCTTATTTTGAAACCCAAAATCCAAATCCCAACTTGCTTTTAGGAGCTGTTGTGGGGGGACCTGATATCAAGGATTCATTCGCAGATTCTCGAGCAGATTTTGTACACTCTGAACCTACAACATACATCAATGCACCTCTTGTGGGTCTTTTAGCTTACTTCAAATCTCATCCATCCTGA 1476 0.4343 MGFTQRLLMILVGTILIVTDRGTGTWQHNYGDALSKSILFFEGQRSGKLPPTQRMTWRKDSALQDGFLVPNTSVDLVGGYYDAGDNVKFNFPMAFSTTMLAWSVIEFGKFMGPDLNHALDAIRWATDYFLKATAIPGFVFAQVGDPYADHNCWERPEDMDTPRIAYAVSKEYPGSEVSAEIAAALAASSIVYRKYHVGYSSRLLQRAIMVFDFADRYRGSYNDSLGRWVCPFYCDFGGYQDELVWGAAWLFKATKLPYYLDYINQNIHNLENFGEFGWDSKDAGINVLVSKLLINSRSNSKPFILNADKFVCAVLPESPSVSVSYSPGGLLFKPGGSNLQHATTFSFLFLVYAGYLKKANKEIDCGGEVFASPRRLRQVARGQVDYILGRNPLNMSYMVGYGPKFPQRIHHRASSLPSMVQHPKHIDCKEGSPYFETQNPNPNLLLGAVVGGPDIKDSFADSRADFVHSEPTTYINAPLVGLLAYFKSHPS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0662 491 Gene3D - 26 490 IPR012341 GO:0005975
Apr5g0662 491 Pfam Glycosyl hydrolase family 9 30 483 IPR001701 GO:0004553|GO:0005975
Apr5g0662 491 SUPERFAMILY Six-hairpin glycosidases 27 488 IPR008928 GO:0005975
Apr5g0662 491 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 386 412 IPR018221 -
Apr5g0662 491 PANTHER ENDO-1,4-BETA-GLUCANASE 14 490 - -
Apr5g0662 491 PANTHER ENDOGLUCANASE 14 490 - -
Apr5g0662 491 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 459 477 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0662 Apr-Chr5 9135473 9138485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0662 28 491 Glycoside Hydrolase AT1G70710 62.393 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0662 K01179 - gmx:100775752 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0662 5 9135473 9138485 Apr5g0662 5 9135473 9138485 ECH