Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0659 ATGGTTTTCCTAATGTCATTGTTTGCACTCATCATAAACAATAGTGATGAGCATAATTTACAAAAGCAGCAAAACAATACTATGATGAAGGCTTTCACAGCGGAAACCATGTCTCAGCTGCCATTAAAGACGAGAGGGGTTGCTGAGGGGGTTTCTGCCAAGTCAAACCCATATCTTTCACACATAGTTCCATATAATTGGACAAATGCCATGTTATCTTGGCAAAGATCAGCTTTCCATTTTCAACCTCAAAAGAACTGGATGAACGATCCTAACGGTCCATTGTTTCACATGGAGTGGTACCATCTATTTTACCAATACAATCCTGACTCAGCGGTGTGGGGCAACATAACATGGGGCCACGCTGTATCGAGGGACTTGATTCACTGGCTCTACCTTCCCATTGCCTTGCTTCCAGATACCTGGTTTGATATCAACGGTGTATGGTCAGGATCCGCCACCGTTTTGCCAGATGGCAAAATCGTGATGCTCTACACGGGTGATACCGATCAATATGTGCAAGTCCAAAATCTTGCCTACCCCGCCAACCTATCTGATCCCCTCCTCCTAGGTTGGGTCAAATATGCCAATAATCCCGTGTTGCTGCCCCCACCCGGCATTGGTTCAAAGGATTTTCGTGACCCCACAACTGCGTGGATTGGCCCTGATCACAAATGGAGGATCGCCATTGGTTCAAAGCTCAACAAAACAGGTCTTTCATTGCTCTATAAAACCCATGATTTCATCCACTATCAGCTCAACGATCACTATTTGCATCATGTACCGGGTACGGGTATGTGGGAGTGCGTGGACTTTTACCCGGTTTCAATAAACGGGTCTCAAGGTTTGGATACCTCTGTAAATGGCCCTGAAGTGAAACACGTGTTGAAGGCTAGTTTGGATGATACAAAAGAGGATCATTATGCGATTGGGACTTACTTCACTGAAAATGACACGTGGGTGCCCGATAACCCGTACGAGGATGTGGGTATTGGGTTGAGATTGGACTATGGCAGATACTATGCTTCTAAGACTTTTTATGACCAACTCAAACAAAGAAGGGTCCTGTGGGGTTGGATTAATGAATCGGATTCCGAAAGTTCTGACTTGAAAAAAGGTTGGGCATCGCTTCAGACAATTCCAAGAACAGTTGTGTTTGACAAGAAGACGAGAAGTAATGTGGTTCAGTGGCCAGTGGAAGAAGTAGAGAGCTTAAGACTAAGCAGTTCTGAATTTGAAGATGTTGTGGTCAAACCAGGCTCAGTTGTGCCACTGGACATAGGCCCAGCCACACAGTTGGATATATTTGCGGAATTTGAGATTGAATTCTTGGCATCTGAAGAGATTGGCGAGGACAATGTAGGGTGTGGAGATGGAGCTGTTGAAAGAAGTGCTTTGGGACCTTTTGGCATTCTGGCTATAGCAGATGACCAACTTTCTGAGCTAACACCAGTTTATTTCCGTCTTTCTAGCACTACTAGCAATGGCAGTTTGACCACTTCCTTCTGTGTTGATGAAACTAGGTCATCAAAGGCTCCGGATGTTTCAAAGCTCGTTTTTGGAAGCAAAGTTCCAGTTCTCAGCGATGAAAAGCTATCAACGAGGGTATTGGTTGACCATTCAATAATTGAGAGCTTTGCCCAGGGAGGGAGAACTGTGATTACATCTAGAGTTTATCCAACAGAAGCAATATATGGAGCTGCAAGATTGTTTCTGTTCAATAATGCAACAGACATAAACATCAAGGCCTCGCTCAAGATTTGGCAATTGAATTCCGCTTTTATACGCCCCTTTCCTTTTGACCAAAGTTTTTGA 1815 0.443 MVFLMSLFALIINNSDEHNLQKQQNNTMMKAFTAETMSQLPLKTRGVAEGVSAKSNPYLSHIVPYNWTNAMLSWQRSAFHFQPQKNWMNDPNGPLFHMEWYHLFYQYNPDSAVWGNITWGHAVSRDLIHWLYLPIALLPDTWFDINGVWSGSATVLPDGKIVMLYTGDTDQYVQVQNLAYPANLSDPLLLGWVKYANNPVLLPPPGIGSKDFRDPTTAWIGPDHKWRIAIGSKLNKTGLSLLYKTHDFIHYQLNDHYLHHVPGTGMWECVDFYPVSINGSQGLDTSVNGPEVKHVLKASLDDTKEDHYAIGTYFTENDTWVPDNPYEDVGIGLRLDYGRYYASKTFYDQLKQRRVLWGWINESDSESSDLKKGWASLQTIPRTVVFDKKTRSNVVQWPVEEVESLRLSSSEFEDVVVKPGSVVPLDIGPATQLDIFAEFEIEFLASEEIGEDNVGCGDGAVERSALGPFGILAIADDQLSELTPVYFRLSSTTSNGSLTTSFCVDETRSSKAPDVSKLVFGSKVPVLSDEKLSTRVLVDHSIIESFAQGGRTVITSRVYPTEAIYGAARLFLFNNATDINIKASLKIWQLNSAFIRPFPFDQSF* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0659 604 Pfam Glycosyl hydrolases family 32 C terminal 401 589 IPR013189 -
Apr5g0659 604 Pfam Glycosyl hydrolases family 32 N-terminal domain 80 398 IPR013148 -
Apr5g0659 604 SMART glyco_32 80 550 IPR001362 GO:0004553|GO:0005975
Apr5g0659 604 Pfam Beta-fructofuranosidase, N-terminal domain 2 72 IPR021792 GO:0004564
Apr5g0659 604 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 9 598 - -
Apr5g0659 604 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 9 598 - -
Apr5g0659 604 SUPERFAMILY Concanavalin A-like lectins/glucanases 398 594 IPR013320 -
Apr5g0659 604 Gene3D Glycosyl hydrolase domain; family 43 84 409 IPR023296 -
Apr5g0659 604 SUPERFAMILY Arabinanase/levansucrase/invertase 73 399 IPR023296 -
Apr5g0659 604 CDD GH32_Fruct1-like 86 384 - -
Apr5g0659 604 ProSitePatterns Glycosyl hydrolases family 32 active site. 80 93 IPR018053 GO:0004553|GO:0005975
Apr5g0659 604 Gene3D - 410 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0659 Apr-Chr5 9085450 9094573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0659 42 598 Glycoside Hydrolase AT1G12240 62.435 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0659 K01193 - gmx:100814788 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0659 5 9085450 9094573 Apr5g0659 5 9085450 9094573 ECH