Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0653 ATGGATTCAGATCGGAGCTCTTCAGGTGGCCGGAAGGTCAAGTTCACCCCAAAAGCTCCACCAAACAGGAAGCCCAAACCCCCGGCATCAACCAAAACCGAAGCTAACGATGAACAAAACGAAGATACCGCACAGGCTCGAGCTCTTTTACGTCGTTGGAATGAGAATATTGCAAGACGCGAGCCTAAAGTTGAAAGAAAATCCAGCGTGGAAGTTGCATTTGGTCCTGGAGGTTCATCATCTTCCCTCAGGACTTATGATGTTACTGATGATAACATTAATGCATCAGCCCGGAAAATTAAAAGAGAGTACAAGGAACCATGGGATTATGACAACTCTTACTATCCTACTACTCTTCCTCTGAGGAAGCCGTATTCTGGAAATCCAGAAATTCTTGACGAGGAAGAATTTGGGGAAGCTGCTACCAGTGTGGAATATGATGAGAAATCTGTCAATCCTTCTGCAGAACTCGGGCTCTTGGAGAAGATTGAGCAACCAAAGATGGTTCTCTTTCAGCTTCCTATTCTGCCTTTGGCCAAGCAATCAGTGAATAATAAGGGGAAGGAGAAAGTTGGCACATTAACTGTGTCGGGAGAGGCCACAAAGTCAAAGGCGAGTGCCTTGGAAGAGTTGCCAACAGGGTATATGGGTAAAATGCAGGTATACAAGAGTGGAGCAATCAAATTAAAACTAGGAGAAACTATTTTCGATGTGTCTCCAGGTTCGAAGTGTATATTTGCTCAGGCTTTTGTGGCGATAAACTTTGCAGAGAAACACTGCTGCGTTCTCGGCGAGCTTAACAAAAGGGTTGATGTAACTCCTGATCTTGATTCACTTGAATTATAA 846 0.4433 MDSDRSSSGGRKVKFTPKAPPNRKPKPPASTKTEANDEQNEDTAQARALLRRWNENIARREPKVERKSSVEVAFGPGGSSSSLRTYDVTDDNINASARKIKREYKEPWDYDNSYYPTTLPLRKPYSGNPEILDEEEFGEAATSVEYDEKSVNPSAELGLLEKIEQPKMVLFQLPILPLAKQSVNNKGKEKVGTLTVSGEATKSKASALEELPTGYMGKMQVYKSGAIKLKLGETIFDVSPGSKCIFAQAFVAINFAEKHCCVLGELNKRVDVTPDLDSLEL* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0653 281 MobiDBLite consensus disorder prediction 53 68 - -
Apr5g0653 281 MobiDBLite consensus disorder prediction 1 86 - -
Apr5g0653 281 Coils Coil 36 56 - -
Apr5g0653 281 PANTHER DNA-DIRECTED RNA POLYMERASE III 85 279 IPR007811 GO:0003677|GO:0005666|GO:0006383
Apr5g0653 281 PANTHER DNA-DIRECTED RNA POLYMERASE III 1 91 IPR007811 GO:0003677|GO:0005666|GO:0006383
Apr5g0653 281 PANTHER DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4-LIKE ISOFORM X1 85 279 - -
Apr5g0653 281 PANTHER DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4-LIKE ISOFORM X1 1 91 - -
Apr5g0653 281 Pfam RNA polymerase III RPC4 184 275 IPR007811 GO:0003677|GO:0005666|GO:0006383
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0653 Apr-Chr5 9013034 9017339 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0653 K03026 - gmx:100787575 336.265