Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0652 ATGACTCTCCTCACTTTCCCTCGCTTTCCTTCCCATTTTCGCTCACTTTCTTCCTTCCCAAACACCCGCTCCTTCCCTTCAACTCGGCGCCACTGCTCAATGACGGCATCTGGAACCGCCATTCTGTGGTTCAAGCACGACCTCCGAACGGACGATCACCCTGGACTCCTTGCAGCCTCCACTTTTCCTTCGCTGGTTCCTATTTACGTCTTCGATCACCGTGTTCTTTCCCGTTTTTCCGACGAAACGCTGGAACTAGTTCTGTTCGCCGTGGGAGATTTGAGGAAATCGTTGAAGGATCGCGGTTCTGATCTAATGATCAGGTTTGGCAATGCTGAGAACGTGATTCTACAACTTGCAACAGAGATTAAAGCCACTTGTGTCTTTGCTGAGCATGAGGTGGAGTATGAACTCCGCGTAATAATGGATGAGGTGAAACAGCGTTTAAAATTGGTCACAGTTCCACAAGGGACTCCAAGGATTGAATTATGGCGAACTCCGTTTTATGATGTGAAGGATCTGCAAAACCTTCCTGCATCATATAATGACTTTAAGAAACTTCGGCTCTCTGTTACTACTCCAGTTCAGATTTCGGTGACAACGTTACGTGGAGCAGACATGGAATTGGATTGGGGTGCTCTTCCCACGTATGAGGATATAAAGGAATTTATGACTAGCTACCAACGGAAATTGGGTGAGAATTGGAGTTTAATTAAGGAGGCTTCGGCTGAAACCTTTTTACACGGGGGAATTTTGAAGCCTGGCGAGAGCAGTGAAAGTTATAGCTTTAGACAAATGCAGTCAAGGGAACCCAATGGATCTGTTTTTGTGACACAAAAAGGAAATGTTGTAGGAGGTGGAACAGACAATGTACTGAATGCATTGGCTGCATATCTGAGATATTTGGAGGGAACAGCTCGTGATGACTGGCAAGAGGTACATGAAAAAGTGCGTGTTTTCGAGAGTCGGAATGGAGCATCATTTATTGGACTATTCGGTCCTGCCCTATCGCTTGGCATTATATCTACAAGAAGAATACATTATGAAGCTACCAAATATGAAAAAGAACGAAATGCAGGATTTTTATCTCCCTTTGGATATTCAGCTGCCACAATTGCAGCAGCAGTTGACGCTGTGTGCTCAATGGAGTGGTATTGGCTTCTGGCTTTGAGAAGTCAGATAACTAATGATGGAATACACTCAACACGGATATGGAAATGGAATGGATTTCTTATCCAGTATACAGTTGCTGGTGAAGATGGTCCTGCTGTTCTTCTTGTGCATGGTTTTGGTGCCTTCTTGGAGCATTTCCGTGACAATATACATGGTTTAGCTGAAGCTGGAAATCGAGTTTGGGCTATCACTATTTTAGGATTCGGCAAATCAGAAAAGCCAAATATTCTATATACTGAACTCTTGTGGGCTGAATTATTGAGAGATTTTATTGTCGATGTTGTCCGTGAACCAGTCCACCTTGTTGGCAACTCAATTGGTGGTTATTTTGTTGCTATTGTTGCATGTATTTGGAGTGTTTTGATCAAATCCATTGTCTTGATCAACAGTGCTGGCAATGTCATCCCAAGATACTCATCAATACCATTGTCTACAATTCAAGATAGACAACCTTCAGGTGCTTCTTGGTTGGGTTCTCGTATTCTTCTATTCTACTTGAGGCTAAGAACTCAAGAAATAGTCAGAAAATGTTATCCAACTAGGGTTGAAAGAGCAGATGATTGGCTCATAAATGAAATGTTAAGAGCATCATATGATCCTGGTGTGGTCGTGGTCATGGAAAGCATCTTTAGCTTTAATCTTTCCATACCTCTTAACTATCTTCTTGAAGATGTCAAGGAAAAGGTTCTAATTATACAGGGGATGAAAGATCCAATTTCTGACTCCAATTCCAAGGTGGCCATGCTTAAAGAACACTGTGATGGGGTTATTATTAAGGAGTTAGATGCCGGCCATTGTCCGCACGATGAGGTGCCAGAACGAGTGAATACTATCATTTGTGAGTGGATACTTGGCGTGGAAAGTAACATTGTGGCAGGGTGTCGAGGGTAA 2064 0.4307 MTLLTFPRFPSHFRSLSSFPNTRSFPSTRRHCSMTASGTAILWFKHDLRTDDHPGLLAASTFPSLVPIYVFDHRVLSRFSDETLELVLFAVGDLRKSLKDRGSDLMIRFGNAENVILQLATEIKATCVFAEHEVEYELRVIMDEVKQRLKLVTVPQGTPRIELWRTPFYDVKDLQNLPASYNDFKKLRLSVTTPVQISVTTLRGADMELDWGALPTYEDIKEFMTSYQRKLGENWSLIKEASAETFLHGGILKPGESSESYSFRQMQSREPNGSVFVTQKGNVVGGGTDNVLNALAAYLRYLEGTARDDWQEVHEKVRVFESRNGASFIGLFGPALSLGIISTRRIHYEATKYEKERNAGFLSPFGYSAATIAAAVDAVCSMEWYWLLALRSQITNDGIHSTRIWKWNGFLIQYTVAGEDGPAVLLVHGFGAFLEHFRDNIHGLAEAGNRVWAITILGFGKSEKPNILYTELLWAELLRDFIVDVVREPVHLVGNSIGGYFVAIVACIWSVLIKSIVLINSAGNVIPRYSSIPLSTIQDRQPSGASWLGSRILLFYLRLRTQEIVRKCYPTRVERADDWLINEMLRASYDPGVVVVMESIFSFNLSIPLNYLLEDVKEKVLIIQGMKDPISDSNSKVAMLKEHCDGVIIKELDAGHCPHDEVPERVNTIICEWILGVESNIVAGCRG* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0652 687 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 39 217 IPR036155 -
Apr5g0652 687 Gene3D alpha/beta hydrolase 396 675 IPR029058 -
Apr5g0652 687 Pfam DNA photolyase 41 174 IPR006050 -
Apr5g0652 687 SUPERFAMILY alpha/beta-Hydrolases 401 674 IPR029058 -
Apr5g0652 687 PANTHER DNA PHOTOLYASE 29 682 - -
Apr5g0652 687 Gene3D HUPs 22 175 IPR014729 -
Apr5g0652 687 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 38 171 IPR006050 -
Apr5g0652 687 Pfam Alpha/beta hydrolase family 424 667 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0652 Apr-Chr5 8978034 8982828 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0652 - - aprc:113864592 1361.67