Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0647 ATGTCGTTTCCGGCGGAGAACAAGAATCCTAACCCTAACCCTAGTCCTCCGTTGAAGAAGAGAGGCCCCAGGTGGTCCGACATGTGGCTGAAGCACAGGAAATCGAAAGCGCTGAATCCAGTGGTAGTGGCGATGCAACTTCACTCCCTCTCCCCTCACATTGACAAAGCCAATCCCTTACTCTCCAATTTCCCCTTCACCGATCGAACCCTTCTCCTCTCCGACGAGCTTCTTCTCAAAATCCTCTCCAAACTCTCCGATTCCCACGCTCAGAGAAACTCCAACTCCCTCGTTTGCAAGCGCTGGCTCAATCTCCAAGATCGCCTCGTTCGCTCCCTCAAGATCTTCGACTGGAACTTCCTCTTATCCGGTAGGTTGATTCACCGCTTCCCCAATCTCAACCATGTCGATTTGCTCTCTGCCGCCCTCATCTCTCCCCGAAATTCCGGCATTTTCCTCAGCAACCGCGTTCTCTGCGTCCACCTCGATTCTGCCTCTTCCCCCAATTGGTGCTTTTGCGAGGACAACATGCTCCCCGTGGAGGTCATCGACAATGGCCTCAGTGCCCTCGCCAGTGGGTGCCCCAATCTCCGGAGACTCCAAGTCATTGGTGCCAGCGAGATGGGTTTGCTGAGTGTAGCTGAAGAGTGCTTGACCTTGCAGGAACTCGAACTCCATAAATGCAGTGACAACGTGCTTCGTGGGATCGCCGCATGTGGGAACCTGCAAATCTTGAAACTGGTGGGGAATGTTGACGGCTTCTACAATTCTGTGGTTTCTGATATTGGTTTGACCATTTTGGCTCAGGGTTGCAAGAGGCTCGTCAAGCTTGAACTTCGTGGCTGCGAAGGCAGCTTTGATGGGATTAAAGCCATAGGCAAGTGCTGCCTCATGTTGGAAGAGTTAACCTTCTCTGATCATAGAATGGATGATGGCTGGCTCGCCTCTCTTTCCTATTGCGAGAATTTGAAGACCCTGAGGTTTCAGTCTTGCAAGAGAATTGATCTCAACCCTGGACTCGAGGAGTATTTGGGTTCTTGCCCTGCACTTGAACGCTTGCACTTGCACAAATGCCAATTGCGCGATAAGAAGAGCGTTGCAGCCTTGTTTTCGGTCTGCAGGGCTGCCAGGGAGATCATTCTTCAGGACTGCTGGGGATTCGATAATTCCCTCTTCGCTTTCGCCATCGTTTGCAGGCGGGTAAAATTGTTATACTTAGAAGGGTGTTCATTGCTAACAACACAAGGATTGGAATCTGTAATTGATTCGTGGAAGGAGCTTCAGAGCCTTAGAGTAATGTCGTGTAAGAATATAAAGGACAGTGAGATTTCTCCTACGCTGGCAACCTTATTTACCATTCTGAAGGAGTTGAAATGGAGGCCAGATACCAAATCACTCCTTCCATCAAGTCTTGTGGGGATAAGCATGGGAAAGAAAGATGTTGACGGTGGAAGTTTGTTCTTTGTTATCTTCCGTCGTACTAGAAGATGA 1491 0.4983 MSFPAENKNPNPNPSPPLKKRGPRWSDMWLKHRKSKALNPVVVAMQLHSLSPHIDKANPLLSNFPFTDRTLLLSDELLLKILSKLSDSHAQRNSNSLVCKRWLNLQDRLVRSLKIFDWNFLLSGRLIHRFPNLNHVDLLSAALISPRNSGIFLSNRVLCVHLDSASSPNWCFCEDNMLPVEVIDNGLSALASGCPNLRRLQVIGASEMGLLSVAEECLTLQELELHKCSDNVLRGIAACGNLQILKLVGNVDGFYNSVVSDIGLTILAQGCKRLVKLELRGCEGSFDGIKAIGKCCLMLEELTFSDHRMDDGWLASLSYCENLKTLRFQSCKRIDLNPGLEEYLGSCPALERLHLHKCQLRDKKSVAALFSVCRAAREIILQDCWGFDNSLFAFAIVCRRVKLLYLEGCSLLTTQGLESVIDSWKELQSLRVMSCKNIKDSEISPTLATLFTILKELKWRPDTKSLLPSSLVGISMGKKDVDGGSLFFVIFRRTRR* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0647 496 MobiDBLite consensus disorder prediction 1 24 - -
Apr5g0647 496 SUPERFAMILY RNI-like 116 250 - -
Apr5g0647 496 SUPERFAMILY RNI-like 256 456 - -
Apr5g0647 496 SUPERFAMILY F-box domain 70 133 IPR036047 GO:0005515
Apr5g0647 496 PANTHER F-BOX PLANT-LIKE PROTEIN 52 468 - -
Apr5g0647 496 Gene3D Ribonuclease Inhibitor 229 458 IPR032675 -
Apr5g0647 496 SMART LRR_CC_2 271 295 IPR006553 -
Apr5g0647 496 SMART LRR_CC_2 347 372 IPR006553 -
Apr5g0647 496 SMART LRR_CC_2 398 423 IPR006553 -
Apr5g0647 496 SMART LRR_CC_2 239 270 IPR006553 -
Apr5g0647 496 SMART LRR_CC_2 194 219 IPR006553 -
Apr5g0647 496 Gene3D - 69 108 - -
Apr5g0647 496 PANTHER UNCHARACTERIZED 52 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0647 Apr-Chr5 8912295 8914445 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0647 K10268 - gmx:100812193 776.163