Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0638 ATGAAACTTGCAGGATATTCCCTTGCCATTTCATTGACTCCTATAGGTTCTAATGTTGTGAAAAACAGTTGTAGATTCTCAGTAGGTATATGTCGTAGGAATTTGTGTAGTTCTAGGTTCTTTTCTGCTCATGCTCAGAAAGAACAATCACGTGATAAAACTGGGGTGGTTGCCAAATACTATCTTCCTCCATGGTTTAGTGTTGCTCCAATGATGGACTGGACAGACAATCACTACAGGACACTAGCACGCCTTATATCAAAACATGCTTGGCTGTACACGGAGATGATTGCGGCTGAAACAATTGTTCATCAAAAGGACAATCTGGACAGATTCTTGGCATATTCTCCAGACCAGCATCCCATTGTGCTTCAAATTGGAGGGAGTAATATGGAAAGTTTGGCAAAAGCAACTGAGCTTGCAAATGCTTATTGCTATGATGAGATCAACTTGAACTGTGGATGCCCTAGTCCAAAAGTAGCTGGGCATGGGTGTTTTGGTGTGAGTCTTATGCTTGATCCCAAGTTTGTTGCTGAGGCTATGTCAGCAATAGCTACCAATACAAATCTACCTGTCAGTGTCAAATGTCGAATTGGTGTGGATGATCATGATTCTTACAATGAGCTGTGTGATTTCATATACAAGGTTTCTTCTCTATCACCCACCAAACATTTTATAATTCACTCAAGGAAGGCACTGCTCAATGGCATTAGCCCTGCCGAAAATAGGAGTATTCCTCCACTAAAATATGAATATTTTTATGGCCTCTTGCGTGACTTTCCTGACCTAACATTTACAATCAATGGTGGCATTACAAGTGTGGATGAGGTCAATGCAGGTCGAGAAGCTGGGGCTCATGGTGTTATGGTTGGACGTGCTGCTTACAATAACCCCTGGCAAATTTTGGGACATGTTGATACTGCAATTTACGGCATGCCAAGCTGTGGTCTTACACGCCGTCAGGTCCTTGAAAAATATCTTGTCTATGGGGACTCAGTACTGGGAAAATATGGACGCAAGCCAGCTGTGCGAGATATTGTGAAGTATGCACACTTCTCTATGAAGGGTTCCTATTTCATTCTACGAGTTAGAAGATTGGAGCCTTTGCTCAATCTTTTTCATTCGGAACCTGGCAATGGACTTTGGAAGCGCAAAGCTGATGCGGCCTTCCGAAATTGCACGACAATCAATTCATTTTTTGAAGAAACCCTTGTAGCAATTCCCGACTCAGTATTGGATTCGCCTGTTGCTGAACCACCACTTGGCCGTGAAGACCTTTTTGCTAACATACAGAATTTATTGCCTCCTCCATACAGAACAAGAGAAAAAGCTGCTATTTGCGCTTAG 1347 0.4254 MKLAGYSLAISLTPIGSNVVKNSCRFSVGICRRNLCSSRFFSAHAQKEQSRDKTGVVAKYYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMIAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGSNMESLAKATELANAYCYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIATNTNLPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVNAGREAGAHGVMVGRAAYNNPWQILGHVDTAIYGMPSCGLTRRQVLEKYLVYGDSVLGKYGRKPAVRDIVKYAHFSMKGSYFILRVRRLEPLLNLFHSEPGNGLWKRKADAAFRNCTTINSFFEETLVAIPDSVLDSPVAEPPLGREDLFANIQNLLPPPYRTREKAAICA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0638 448 SUPERFAMILY FMN-linked oxidoreductases 65 359 - -
Apr5g0638 448 CDD DUS_like_FMN 66 299 IPR035587 -
Apr5g0638 448 Gene3D Aldolase class I 62 305 IPR013785 -
Apr5g0638 448 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 57 446 IPR004653 GO:0002943|GO:0017150
Apr5g0638 448 PANTHER TRNA-DIHYDROURIDINE SYNTHASE 57 446 - -
Apr5g0638 448 Pfam Dihydrouridine synthase (Dus) 68 350 IPR035587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0638 Apr-Chr5 8789535 8794172 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0638 K05539 - gmx:100779457 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0638 5 8789535 8794172 Apr5g0638 5 8789535 8794172 ECH