Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0637 ATGGGATTTGATAATGAGTGCATAGTTAACATTCAATCTCTTGCTGGAGAGTACTTTTGTCCTGTCTGTCGCCTGCTCGTATTTCCAAATGAAGCTTTGCAGTCGCAATGTACCCACTTGTACTGTAAGCCGTGTTTGACATATGTTGTGAGCACTACAAGGGCTTGCCCATATGATGGTTACTTGGTCACTGAGGCAGATTCCAAGCCTCTGATTGAGTCGAATAAGGCACTTGCCGAAACTATTGGAAAAATACCAGTTCATTGCCTTTATCATAGGAGCGGATGCACATGGCAAGGAACTCTGTCTGAGTGTACATCTCATTGTTCTGGCTGCGCTTATGGCAATTCTCCTGTTGTTTGCAACAGGTGTGGGATCCAAATAGTGCATCGCCAAGTGCAAGAACATGCACAAAATTGCCCTGGTGTGCAAGGCCAGGTACAACAAGTGGCCATTACCCAGGATCCTTCAGCCACTAGTGCTGTTGCTTCTACAGATCAGACCCAGGCTGCTGCTCCTGTTGGAACAACTGCTTCACAAGCTCTTCCTTCTCAAACTGCTGTCACAACTACTGCACCTGCACATGCTTCAAATCAGCTTACCAATCCAGCTTCTCAATCCCAAGCCGTAGTTCAAACAGTTGTGCAGCCAACAGCCGAGCAATGGTATCAGCAACAACAATATCAACAATACTACCAGCAATACCCTGGACAAGATCCATACCAACAACAGTATCAAAATTACTACCCCTATCAACAATCTGCTGTTCCACAATACCAGCAGGCCTATGGTCAGCCGCAACATCAGTCTCAATCACAGCCCCAGGCTCAACTTCAACCTCAGCCCCTGGCCCAACTTCAACCTCAGCCCCAGCCACAGGCCCAAAACCAATCTCAGCCTCAACAACCACAACCTCAGGTACATGGACTGTCTCAACCACTTTCACATGTTCAGGCTCCTGTAGCCCCACCATCTCAGAATCAGGTTCAAGTTCACCAACAACCGCAGCAATTTCAACCTTTTGTTCAGCCACATGGTCAGACGAGTCATCCACCAGTCCCCAGTCAATCCCTACCTCAGCCTCAGCCTCAGCCTTATCCTTACCCCCAAGTTCAGCCTCATTCTGTCCAACCTCAACCCCAACAACATATGCAAATGCCTCCTTATCAGCAGCCTCTTCCTCAGATGCAACATTCACAGCCTCAAATTCAACAACCTGTTCAGAAGTATCCTGTTCCTCAATCTCAAGTTCATCCGCAACTGCATCCTCACCAGCCTCCCATGCATCCTCACCAGCCTGTTGCTCCTAATGTCCAACCTCAAGTGCAAAATGCAACGTCACATGCAGTTACAGGTCATCAGTCTTATCCCCAACCTCTTCCTCACCATAATACGCAACCAGGTGTCCCTCAACATGCTATGCACATGCATCCTCAAGCTGGGCCCCAACCCCAGGGCCAGCATCCTGTCCAAACACAGAGTCAGTTTCCTCCCCAAATTCCAATGATGCGTCCTAATCAATCTCATGCTATGTTTCCTAATCAGCAACAGCCAGCTTTGGTGCCTTCACCTGTTCGGGGCCAAACTACCCCTCCTATGCAACATCAGCCAGTATATACTCATAATCAACAACCTGGCCAAATCAACCAACGTCCTTTTTTGCAACCCATTCAACAAATACCTCCACAGCCCTTTTCACAACACCAAGCACCTATGCCATCTCATTTACGACCCCAGGGTTCAGCTAATTCATTTCCCAAGCATGCTTATCCGCAGTCACAGGGTAATACTGCACTATCAAATAGCAGTCATCTCAGTCAATCTCAAAATGCTGTGGGAAGGCCTTTACTTCCTAATCATGCAGGACACATACAGCCATATGCACAATCTGCTAATACAATTCCAGTTAGACATGGGCAAAATGGTGCTGGCTTCCTGCCTGAAAATCAGAATTTGTTGATTGGGGCCAACAATCAAGTACAGTTGCCTTCTGAACTGCAGTCTAGACCATCAGAACCAATTGAAAGACACAACGTGAATGAGCAGAAAACTGACTCTTCCTCTGGGAAACATAGTAAGAACTTTAAAGATTTGGACACAGTGTCTGGATCAGCAAGTGAATTGAAATCTGATAAAGTTGAAACAGATTTTAAACCAATTGAGGTTGGGAATAAGCAACATAGTGAAGATCCACACTCTGTGAAGACTTTACTCCCAAGTGCCAATGCATTAGAAAATGGTGATTCAGTAAATAAGAATCATGGTATAGGAGAGGCTACTGAAAGCAATTGGAAGCCTTCAAGTGGTAATAAGTCAGGTGGTGTGGTGACTGGGGTTCAAAATGGTAATGATGAACACTCTGTCCGAGGCAATGAATTTCAAGATGGACCTCTACCAAAGACAGAAGCAAAAGTCCCTGAGTCCGAAATTGATAAATTGCATAAAGATGATACATGTACTCCAAGACCTCATCCTGGTGCTGGCACTCCAACACCATCTGTCTCTCAAAGCAATGAGGGTTTTGCACAGCTGTCTCATCATGCCACTTATACTGATCAGACTAAGCATCAACAACCAATGATTAATTTTGGGCCTGCTTCTGTCCAGAAGAGACAATTGCCACATTCAGCAGTTCCAAATCAGCCCCTCTCTGAAGGGAACTCTTCAACCCTTGTTAGGAATCATGGACCTGCCCATGCTTTTCATTCGGGACAACCCTTAACAGAGAATTTTCAGCCAACCATGTTTAAGCAGCTGCAAGATTCTGACATCCAGTTCAATACACCAGGGCGAAGCTTTCAACCTCAGTCACATGGACCCTCAGGGCCATATAACCAAGTCCATGAGCCTCCTTTCCATTCTGGAGCATCCAATTTGTCTCATATAGGAGGGCCTCAATTTGGTGCTCCACTTCCTGGAGATATGCATGGTAGAGTGACAGCCAACTTACCACCTCATGCTCCTGAAGGTTTTGGTTTGCAGGATGAAAGGTTCAAACCTTTCCATGCTCCAAATCAACAAAACATTGATCGAAGAGAGTTTGAGGATGATCTTAAGAAATTCCCTAGACTGCCTTTGGATGCTGAGCCAGTTTCTAAATTTGGAAATTATTCATTAGGTCCACATGAAGCTGGAAAGAGACCCGTTGGTTATCATGATGATGTCATTAAGAAATCAGGTCCTACTCTCCATCCTGGTTATCTTGGACCAGATCCTGGATATGGGAGACATCATATGGATGGTATGGCTCCAAGAAGTCCTGTTAATGAATATTCTGAAATGTCTTCCCGGAGATTGGGCCCCCACTCTGGTGGTCTTGTTGGTAAGTCAGGAATAGATGATTTTGATGGCAGAGTTGCACGTCGTTTTGGTGAGTTTCGTGATAGCCGGTTTCCTCATTTGCCTAGCCATTTGCATAGAGATGAATTTGATGGTTTTGGTAGCTTTCGAATGGGTGAACATCCAAGGAGTGGTGATTTCATTGGTCATGGCGAATTTGGTGGCCATTTTCGTAGGGGTGAACATTTGGGTCCACATAATTTTTCTAGACATTTGCAGCTTGGGGAGGCTGTTGGTTTTGGTGCCCATCCAGGTCATATGAGAGCAGTTGAACTTGGCAGTTCTCGGACTTATGAATCTTTCAGCAAAGGCAACAGGCCAGGTCATCCACAACTTGGTGAGCCTGGGTTCAGGAGCAGCTTTTCGCTCTCAGGATTTCCCAATGATGCTGGGTTTTTAACAGGAGATATCAGGTCATTTGATAATTTGAGGAGAAGGAAAGCATCTAGCATGGGATGGTGCCGGATATGTAAACTTGACTGTGGTACAGTTGAAGGTTTGGACTTGCATTCTCAAACAAGAGAGCACCAGAAGATGGCCATGGATATAGTTAAAACAATCAAACAAAATGCAAAGAAACAGAAATTAATAGCTAGTGAACAACACTCAGTTGATGAGGGAAACAAGACATGGAATACTGGTTTTGAGGGTCGTGGGAGTAAGCATTGA 4008 0.4546 MGFDNECIVNIQSLAGEYFCPVCRLLVFPNEALQSQCTHLYCKPCLTYVVSTTRACPYDGYLVTEADSKPLIESNKALAETIGKIPVHCLYHRSGCTWQGTLSECTSHCSGCAYGNSPVVCNRCGIQIVHRQVQEHAQNCPGVQGQVQQVAITQDPSATSAVASTDQTQAAAPVGTTASQALPSQTAVTTTAPAHASNQLTNPASQSQAVVQTVVQPTAEQWYQQQQYQQYYQQYPGQDPYQQQYQNYYPYQQSAVPQYQQAYGQPQHQSQSQPQAQLQPQPLAQLQPQPQPQAQNQSQPQQPQPQVHGLSQPLSHVQAPVAPPSQNQVQVHQQPQQFQPFVQPHGQTSHPPVPSQSLPQPQPQPYPYPQVQPHSVQPQPQQHMQMPPYQQPLPQMQHSQPQIQQPVQKYPVPQSQVHPQLHPHQPPMHPHQPVAPNVQPQVQNATSHAVTGHQSYPQPLPHHNTQPGVPQHAMHMHPQAGPQPQGQHPVQTQSQFPPQIPMMRPNQSHAMFPNQQQPALVPSPVRGQTTPPMQHQPVYTHNQQPGQINQRPFLQPIQQIPPQPFSQHQAPMPSHLRPQGSANSFPKHAYPQSQGNTALSNSSHLSQSQNAVGRPLLPNHAGHIQPYAQSANTIPVRHGQNGAGFLPENQNLLIGANNQVQLPSELQSRPSEPIERHNVNEQKTDSSSGKHSKNFKDLDTVSGSASELKSDKVETDFKPIEVGNKQHSEDPHSVKTLLPSANALENGDSVNKNHGIGEATESNWKPSSGNKSGGVVTGVQNGNDEHSVRGNEFQDGPLPKTEAKVPESEIDKLHKDDTCTPRPHPGAGTPTPSVSQSNEGFAQLSHHATYTDQTKHQQPMINFGPASVQKRQLPHSAVPNQPLSEGNSSTLVRNHGPAHAFHSGQPLTENFQPTMFKQLQDSDIQFNTPGRSFQPQSHGPSGPYNQVHEPPFHSGASNLSHIGGPQFGAPLPGDMHGRVTANLPPHAPEGFGLQDERFKPFHAPNQQNIDRREFEDDLKKFPRLPLDAEPVSKFGNYSLGPHEAGKRPVGYHDDVIKKSGPTLHPGYLGPDPGYGRHHMDGMAPRSPVNEYSEMSSRRLGPHSGGLVGKSGIDDFDGRVARRFGEFRDSRFPHLPSHLHRDEFDGFGSFRMGEHPRSGDFIGHGEFGGHFRRGEHLGPHNFSRHLQLGEAVGFGAHPGHMRAVELGSSRTYESFSKGNRPGHPQLGEPGFRSSFSLSGFPNDAGFLTGDIRSFDNLRRRKASSMGWCRICKLDCGTVEGLDLHSQTREHQKMAMDIVKTIKQNAKKQKLIASEQHSVDEGNKTWNTGFEGRGSKH* 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0637 1335 ProSitePatterns Zinc finger RING-type signature. 37 46 IPR017907 -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 744 787 - -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 375 421 - -
Apr5g0637 1335 SUPERFAMILY RING/U-box 13 73 - -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 1310 1335 - -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 670 697 - -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 341 622 - -
Apr5g0637 1335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 7 117 IPR013083 -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 929 959 - -
Apr5g0637 1335 ProSiteProfiles Zinc finger RING-type profile. 20 59 IPR001841 -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 666 712 - -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 354 374 - -
Apr5g0637 1335 SUPERFAMILY TRAF domain-like 84 141 - -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 436 462 - -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 484 614 - -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 929 943 - -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 744 838 - -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 258 312 - -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 802 821 - -
Apr5g0637 1335 MobiDBLite consensus disorder prediction 173 204 - -
Apr5g0637 1335 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1A-LIKE 1 1334 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0637 - - gmx:100814445 1776.53