Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0597 ATGACACCCCTTTCGTCTCAAAATGTTATTACAGAGCATATAAGAAGATCTGCAAATTATAAACCCAACATTTGGAAACACCACTTTCTGCAGTCACTTGCCAGTAATTTTGATAAGGAAGAATTTGTTATGCTTTTAAACAAGCAGGTGACTGAATTAAGGAGTCTTTTAGTTCAAGAGACAAGCGTTTTGCAAAAATTACAGTTGGTTGATTGGATCCAGAAACTAGGTCTTGCCAACCACTTTCTGAAGGAAATAGATGAATTTCTGGAATCCTTATTTGTCTATGTCAAAAACAGCAACATTAATACAGTTGTAGAAGAAAGTTTGCGGGTATCTGCACTATGCTTCAGGCTTCTAAGACAGCATGGATATGAAGTTTTGCCAGATATACTACTGAGCAACTTCTTAGATGAAGAAGGTAAAATGATGAGAAAAAGCTCATGTGGTGGTGATTTAAAAGGTGTTTTAGAGCTTCTTGAGGCCTCACATTTGGGCTTAGAAGGAGAAAACATCTTCGATGAGGCCAAAACTTATGCAATTAATTCTCTCAAGGTTGCTTTCTCAACGAGTTCCGTGAACACCAATCAACTTTCTACCCTGCTTGTTGAAAGAGTGGTCCATGCCTTGGAGCTTCCCTCCCGCTGGAGAGTACCTTGGTTTGAAGTCAAATGGCACGTTAGCCAATACCTAAATGGAACACAAATGGACCCTACTTTACTTGAATTGGCTAAATTAAATTTCAATATAATTCAGGCCAAACTTCAAAAGGAGGTCAAGGAATTATCCGGGTGGTGGGAGAATCTTGGCATAAATAAAGAGTTGAGCTTTGCAAGAAATAGGTTGGTCGAAAGCTTCATGTGTGCAGCAGGAGTTGCCTTTGAGCCTAACTACAATTCTGTCAGGAAATGGCTCACTAAAGTGATTATTTTCGTACTAGTTATTGATGATGTTTATGACGTACACGCCTCATTTGAAGAATTGGAGCCGTTCACAATGGCATTTGAGAGATGGGACGAAAAAGAACTTGATGCACTTCCAGAGTACATGAGAATTTGCGTCCGTGCACTTAAAGATGTAACAAATGAAATTGCTTATGAAATTGGCGGGGAAAATAAGTTCCACTTGGTGTTACCTTACCTAAAGAAAACGTGGAAAGACTTTTGCAAAGCATTACACGTGGAAGCAAAGTGGTACAACAAGGGATATATTCCATCGTTGCAAGAATATTTAAGCAATGCTTGGATTTCATCTTCGGGGCCTGTAATTCTGCTCCATTCATATTTTGCTACAATGCACGAAGCATCGGATGAGATAGAGGATTTTCTACACACTTACGAAGATTTGGTCTACAGTGTGTCTCTTGTAATTCGACTATGCAATGATTTAGGAACTGAAGTGGCTGAAAGAGAAAGGGGAGATGCTGCTTCGTCAATCCTTTGCTACATGAATGAAATGAATGTCTCGGAGGAAACAGCAAGAAAGCATATTCAAGACATCATAAACAATGCATGGAAAAAGATAAATGGGATTTGCTCCTCTCGACTTGCTTCGATGGAGTCATTTCATACCCAAGCCATAAATGCAGCTCGTGTAGCCCATACCCTTTATCAAAATGGCGATGGCTTTGGTACACAGGACCGAGATATCAAAGAGCATATCTTATCACTAATTATTGAACCCCTATAA 1689 0.3943 MTPLSSQNVITEHIRRSANYKPNIWKHHFLQSLASNFDKEEFVMLLNKQVTELRSLLVQETSVLQKLQLVDWIQKLGLANHFLKEIDEFLESLFVYVKNSNINTVVEESLRVSALCFRLLRQHGYEVLPDILLSNFLDEEGKMMRKSSCGGDLKGVLELLEASHLGLEGENIFDEAKTYAINSLKVAFSTSSVNTNQLSTLLVERVVHALELPSRWRVPWFEVKWHVSQYLNGTQMDPTLLELAKLNFNIIQAKLQKEVKELSGWWENLGINKELSFARNRLVESFMCAAGVAFEPNYNSVRKWLTKVIIFVLVIDDVYDVHASFEELEPFTMAFERWDEKELDALPEYMRICVRALKDVTNEIAYEIGGENKFHLVLPYLKKTWKDFCKALHVEAKWYNKGYIPSLQEYLSNAWISSSGPVILLHSYFATMHEASDEIEDFLHTYEDLVYSVSLVIRLCNDLGTEVAERERGDAASSILCYMNEMNVSEETARKHIQDIINNAWKKINGICSSRLASMESFHTQAINAARVAHTLYQNGDGFGTQDRDIKEHILSLIIEPL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0597 562 SFLD Isoprenoid Synthase Type I 237 561 - -
Apr5g0597 562 SUPERFAMILY Terpenoid synthases 236 562 IPR008949 -
Apr5g0597 562 Pfam Terpene synthase family, metal binding domain 241 507 IPR005630 GO:0000287|GO:0010333|GO:0016829
Apr5g0597 562 SFLD Terpene Cyclase Like 1 C Terminal Domain 237 561 IPR034741 -
Apr5g0597 562 CDD Terpene_cyclase_plant_C1 15 561 IPR044814 GO:0010333|GO:0016102
Apr5g0597 562 Pfam Terpene synthase, N-terminal domain 24 210 IPR001906 GO:0010333|GO:0016829
Apr5g0597 562 PANTHER ALPHA-FARNESENE SYNTHASE 13 562 - -
Apr5g0597 562 Gene3D - 61 236 IPR036965 GO:0010333|GO:0016829
Apr5g0597 562 Gene3D Farnesyl Diphosphate Synthase 22 552 IPR008949 -
Apr5g0597 562 PANTHER OS04G0344100 PROTEIN-RELATED 13 562 - -
Apr5g0597 562 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 24 230 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0597 Apr-Chr5 8148703 8152057 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0597 K14173 - gmx:100812119 868.226