Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0593 ATGAGATACCCATCTCTTAGCCTCGTTGGAGAAGACAACATTCTACTCCTCACGATCTTGTTCCTCAGTTGCATAGCCATTCAGGTTAACTTGTGTCTTTCGAGTATCCCTTCACCACTGAAAGCACTTTCCCTTGGGGGCCATTTGAACTTTGATGAAGCTAGCCTTAGCCATGCAGCGAGGGACTTTGGGAACAGGTACCAATATCATCCAATGGCAGTGCTGCATCCAGAATCAGTTTCTGATATTGCGGCCACCATAAAGCATATATGGTTGATGGGTCCCAGTTCACAGCTCACAGTTGCAGCAAGGGGCCACGGCCATTCACTCCAGGGCCAAGCACAAACTCATGGAGGAGTTGTTATCAACATGGAATCACTAAAAGTCCCAGAAATGCAGGTACATGTGGGAAATTCTCCGTACGTAGATGTCTCAGGTGGAGAGTTGTGGATAAACATTCTGCATGAGACTCTAAGGTACGGGTTGGCTCCAAGATCTTGGACTGATTACCTACATCTCACGGTTGGTGGCACTCTCTCCAACGCTGGTGTCAGTGGACAAGCATTTAGGCATGGTCCCCAGATAAGCAATGTTCAGCAACTGGAGATTGTTACAGGAACAGGGGAGGTGGTAAACTGTTCCGCGGAGCAAAATGAGGAACTCTTTCACAGTGTTCTTGGAGGGCTTGGCCAGTTTGGCATTATAACCCGCGCAAGAATTATCCTTGAACCTGCACCTGCCATGGTAAAATGGATTAGAGTGCTGTACTCAGATTTCACAGAATTCATAAGGGACCAAGAGCGATTAATATCTGAAGAAAACACGTTTGATTACATTGAAGGATTTGTTATAATAAACAGAACTGGCCTGCTAAATAATTGGAGATTATCGTTCAACCCACAAGACCCAGTTCAGGCTAGTCAGTTCAAGTCTGATGGAAGAACTCTCTTCTGTCTTGAATTAGCCAAATACTTCAACTTGGAAGTAAACCATGCAGTAAGCCAGCAAGTTGAGAAACATTTGTCCCGTTTAAGCTACATCCCATCAACCCTTTTTTCAACAGAAGTCACACTCGTAGATTTCTTAGACAGGGTGCATGTATCCGAGGTCAAATTGCGTTCAAAAGGGTTGTGGGATGTTCCACACCCTTGGCTCAATCTTCTAATACCCAAAAGCAAAATACACAACTTTGCTGAAGTAATCTTCGGGAATATCCTAACAGAAACAAGCAATGGCCCCGTCCTTATCTACCCAGTAAATAAATCAAAGTGGGACAACAGAACTTCTGTGGTTATTCCAAATGAAGATGTTTTCTATTTAGTGGCATTTCTTACATCTGCAGTACCTTCTTCCAATGGGACTGATGGGCTTCAACACATACTAAATCAGAACAAAAGAATCTTAGAATTCTGTGAAAGAGCCCATCTTGGAGTGAAGCAATATTTGCCCCACTACAATACACAGCAAGAATGGCGGGCCCATTTTGGGCCTCAGTGGGAGACTTTTCTGCAAAGAAAATCTTCTTATGACCCATTGGCAATACTCGCCCCAGGCCTACGTATATTTCAAAAAGCAATAACCTTCTCATGA 1590 0.4403 MRYPSLSLVGEDNILLLTILFLSCIAIQVNLCLSSIPSPLKALSLGGHLNFDEASLSHAARDFGNRYQYHPMAVLHPESVSDIAATIKHIWLMGPSSQLTVAARGHGHSLQGQAQTHGGVVINMESLKVPEMQVHVGNSPYVDVSGGELWINILHETLRYGLAPRSWTDYLHLTVGGTLSNAGVSGQAFRHGPQISNVQQLEIVTGTGEVVNCSAEQNEELFHSVLGGLGQFGIITRARIILEPAPAMVKWIRVLYSDFTEFIRDQERLISEENTFDYIEGFVIINRTGLLNNWRLSFNPQDPVQASQFKSDGRTLFCLELAKYFNLEVNHAVSQQVEKHLSRLSYIPSTLFSTEVTLVDFLDRVHVSEVKLRSKGLWDVPHPWLNLLIPKSKIHNFAEVIFGNILTETSNGPVLIYPVNKSKWDNRTSVVIPNEDVFYLVAFLTSAVPSSNGTDGLQHILNQNKRILEFCERAHLGVKQYLPHYNTQQEWRAHFGPQWETFLQRKSSYDPLAILAPGLRIFQKAITFS* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0593 529 Gene3D - 56 522 IPR016167 -
Apr5g0593 529 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Apr5g0593 529 SUPERFAMILY FAD-linked oxidases, C-terminal domain 246 522 IPR016164 GO:0003824|GO:0050660
Apr5g0593 529 Pfam FAD binding domain 71 214 IPR006094 GO:0050660
Apr5g0593 529 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 71 106 IPR006093 GO:0016491
Apr5g0593 529 PANTHER GULONOLACTONE OXIDASE 14 526 - -
Apr5g0593 529 ProSiteProfiles PCMH-type FAD-binding domain profile. 67 245 IPR016166 GO:0071949
Apr5g0593 529 Gene3D - 124 247 IPR016169 -
Apr5g0593 529 Gene3D - 248 481 IPR016170 -
Apr5g0593 529 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 14 526 - -
Apr5g0593 529 SUPERFAMILY FAD-binding/transporter-associated domain-like 45 244 IPR036318 GO:0050660
Apr5g0593 529 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 246 522 IPR015345 GO:0009690|GO:0019139|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0593 Apr-Chr5 8047013 8049615 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0593 K00279 - gmx:100808619 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0593 5 8047013 8049615 Apr5g0593 5 8047013 8049615 ECH