Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0591 ATGAGTGATTCTAAGATGATAGTTTTCGGCTCATTCACTGAAGATGAAACCCGATCATTGCTGTTAAAGCCGACTTCTGGGAGAAATGAAACGCCTGTGGAGAAGAATGAGCTGCAATTTGGTTCTCTGAATTCCGTTACTGTTGAATCAAGCAACTTGCTAAATTCATCGAAAGCACCAGATAGTGATCCTCCCTCTGATTCTCAGAAATGTAATGGAGTGAAAACTGATAGTTACAATTCACCTAATGTATCAGGAACAATCAAAGAGAATGGCAGCATTACCAATTTCTCCCCTAGCCCCACGAGCATCATTACTGTAAATGAAGTTGAAGAAAATAACGAGAATTCTTTTACATTACTTGGTGAAGGTAGTCCCTCGAACAAGTTTACAAATTTGAGCCTAGATGTTTCTGAGGCTGGAAGCTTGAAGAATGTACAAGAAACTAGAGGTGGTGATTATTCTTCATCAAAATTATCTGATCAAGACCCCAAAAAGGCAACCAATGGGCATGCTGTTATGCATGCTAGAAATCTGCTGCCTCGAGGCCTTATTAACCCTGGCAATCTGTGCTTTCTTAATGCAACTATGCAGGCTCTCTTGTCATGTTCACCTTTTGTTCAGCTATTACAGGAAATAAGAACTCGCAACCTTCCCAAGGTTGGGTATCCCACGTTGGCGGCATTTGCAGAGTTTATAACCCAATTTGACATGCCAAGCACTACAAAATTAAAGCAGAAAGATGCCGATACTTTTGAGTCTGGAAGGCCATTTTGCCCTGTTATGTTTGAAAGTGTTTTAAAAAATTTTACTCGGGACGTGGCAGATAGCTTTTCAGGAAGACCAAGGCAGGAAGATGCTCAGGAATTTCTGAGCTTTGTAATGGATCAAATGCATGATGAATTACTGAAGCTTAAAGGACCGTCTTCAAGTCTTAATGGTAGCAAATCTTCTCTGGTTTCTTCTGTGGAAGATGATGAATGGGAAACTGTGGGGCCAAAGAATAAATCTGCTGTAACAAGGACTCAAAGCCTTGTTCCATCAGAATTAAGTGGTATATTTGGAGGACAGCTTAGAAGTTTGGTGAGAGCTAAAGGAAATAGAGCTTCTGCCACTGTTCAACCATATCTCCTGCTCCATCTTGACATTTATCCAGATTCTGTTCATACCATCGAGGATGCACTTCACTTGTTTTCTGCACCAGAAACCTTGGAAGGGTATCGAACATCACTCACTGGAAAGGCTGGTGTCGTGACTGCAAGAAAATCTGTACAAATAGTGACACTCCCAAAAATATTGATATTGCACCTGATGCGTTTTGGTTATGGAAGCCAGGGAAGCACCAAGTTGCATAAGCCTGTGCACTTTCCTCATGAGTTCGTATTTGGTCGTGACTTGCTCGTTTCACCTTCTACAGAGGGTCGAAGGTATGAACTTGTTGCTACGATTACTCACCATGGAAAGGAGCCTTCAAAGGGGCACTACACGGCTGATGCTCAATACTCCAACGGTCGGTGGCTACGATTTGATGATGCATCTGTCTTTGCCATTGGAGCAAATAAGGTGCTGCATGATCAGGCATATGTCCTTTTCTACAAACAGATGTGA 1608 0.4204 MSDSKMIVFGSFTEDETRSLLLKPTSGRNETPVEKNELQFGSLNSVTVESSNLLNSSKAPDSDPPSDSQKCNGVKTDSYNSPNVSGTIKENGSITNFSPSPTSIITVNEVEENNENSFTLLGEGSPSNKFTNLSLDVSEAGSLKNVQETRGGDYSSSKLSDQDPKKATNGHAVMHARNLLPRGLINPGNLCFLNATMQALLSCSPFVQLLQEIRTRNLPKVGYPTLAAFAEFITQFDMPSTTKLKQKDADTFESGRPFCPVMFESVLKNFTRDVADSFSGRPRQEDAQEFLSFVMDQMHDELLKLKGPSSSLNGSKSSLVSSVEDDEWETVGPKNKSAVTRTQSLVPSELSGIFGGQLRSLVRAKGNRASATVQPYLLLHLDIYPDSVHTIEDALHLFSAPETLEGYRTSLTGKAGVVTARKSVQIVTLPKILILHLMRFGYGSQGSTKLHKPVHFPHEFVFGRDLLVSPSTEGRRYELVATITHHGKEPSKGHYTADAQYSNGRWLRFDDASVFAIGANKVLHDQAYVLFYKQM* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0591 535 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 535 - -
Apr5g0591 535 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 477 495 IPR018200 GO:0004843|GO:0006511
Apr5g0591 535 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 535 - -
Apr5g0591 535 Pfam Ubiquitin carboxyl-terminal hydrolase 183 532 IPR001394 GO:0004843|GO:0016579
Apr5g0591 535 SUPERFAMILY Cysteine proteinases 178 533 IPR038765 -
Apr5g0591 535 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 182 535 IPR028889 -
Apr5g0591 535 MobiDBLite consensus disorder prediction 18 95 - -
Apr5g0591 535 MobiDBLite consensus disorder prediction 141 163 - -
Apr5g0591 535 Gene3D Cysteine proteinases 169 534 - -
Apr5g0591 535 MobiDBLite consensus disorder prediction 141 167 - -
Apr5g0591 535 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 183 198 IPR018200 GO:0004843|GO:0006511
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0591 179 535 Miscellaneous Gene Families AT2G24640 28.650 1.48e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0591 K11841 - gmx:100799656 847.81