Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0586 ATGGCGCTTAAAACCCTATCCACTTTCCTCTCACCTCTTTCTCTCCCCAATCCCAAATTTCCGCAACTCCTCTCCACCAAACCGTGCCTCATTCTCTGCGAATTTCCACGCCCTCAGAAATCGCGTTTGCCCGCCGCCGAATCCGAAGGCACCGGCGCCGCTGCTCCCTCGCCGGGAGAGAAGTTCCTCGAACGCCAGCAATCAATCGACGCTGCTAAGCTCATTCTCAAACAGAACCAAAAGAACAAAAAGAGAGAGAAGCCTTTAAAAGCTTCTAAAACCGTCGCTTCTTGCTACGGTTGCGGCGCTCCGTTACACACTTCGGATGTGGATGCACCTGGCTACGTCGATCCTGAAACCTATGAATTGAAGAAGAAACATCACCAGCTTAGAACCGTTCTCTGTAGGCGGTGCCGGCTTTTGTCTCATGGCAAGATGATAACTGCTGTTGGAGGACACGGAGGATATTCTGGCGGTAAATTATTTGTTACTGCTGAAGAGCTTCGAGAAAAGTTGTCTCACTTGCGTCACGAGAAAGCTCTAATTGTCAAATTGGTTGATATTGTTGACTTCAATGGCAGTTTTTTGTCTCGTGTGCGAGATCTTGCTGGTGCTAATCCAATAATATTGGTGGTGACTAAGGTTGATCTCCTTCCAAGAGATACTGATCTTAATTGTATTGGGGATTGGGTTGTGGAGGCTACCACAAGAAAAAAACTGAATGTTCTCAGCGTCCATCTGACCAGTTCCAAATCATTGGTTGGAATTACTGGAGTGATATCAGAAATCCAGAAAGAGAAGAAGGGAAGAGATGTTTACATTCTGGGTTCAGCTAATGTTGGGAAATCTGCTTTCATCAATGCCTTACTAAAAACAATGGCTATAAATGATCCAGTGGCTGCATCTGCTCAAAGATACAAACCAATACAATCTGCAGTTCCTGGAACAACCTTAGGGCCAATTCAAATCAATGCTTTCCTAGGAGGAGGGAAATTGTTTGATACACCTGGAGTTCATCTCTACCATAGGCAAAGTGCAGTTGTTAATTCTGAAGATTTACCCTCACTTGCTCCTCAAAGCCGACTAAGGGGCCGGTCTTTCCCTAGTTCTCAAGTCTCTTCAGACAATGTAGAAGAAGGAGCTTCTATAGTGAATGGCTTGAATGCATTCTCAATATTTTGGGGAGGTCTTGTTAGAATTGATGTCTTGAAGGTTCTCCCAGAAACTTGTTTGACATTTTATGGGCCCAATAGACTACCAATTCATATGGTACCCACAGAGCAAGCAGATGAATTTTATCAGAAAGAACTTGGAGTTTTGCTGACCCCTCCAAGTGGAAGAGAAAAGGGCGAGAACTGGAAAGGACTTGAATCAGAACGTAAATTGCAAATAAAATTTGAAGATGTGAAAAGGAGGAGCGGTTGCATTTCCATTTCTGACTTCAATCTTCGACCTTTTCCAAAATCTGGGACCAACCAATTTTCCCTGTATTATTAA 1497 0.4409 MALKTLSTFLSPLSLPNPKFPQLLSTKPCLILCEFPRPQKSRLPAAESEGTGAAAPSPGEKFLERQQSIDAAKLILKQNQKNKKREKPLKASKTVASCYGCGAPLHTSDVDAPGYVDPETYELKKKHHQLRTVLCRRCRLLSHGKMITAVGGHGGYSGGKLFVTAEELREKLSHLRHEKALIVKLVDIVDFNGSFLSRVRDLAGANPIILVVTKVDLLPRDTDLNCIGDWVVEATTRKKLNVLSVHLTSSKSLVGITGVISEIQKEKKGRDVYILGSANVGKSAFINALLKTMAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFLGGGKLFDTPGVHLYHRQSAVVNSEDLPSLAPQSRLRGRSFPSSQVSSDNVEEGASIVNGLNAFSIFWGGLVRIDVLKVLPETCLTFYGPNRLPIHMVPTEQADEFYQKELGVLLTPPSGREKGENWKGLESERKLQIKFEDVKRRSGCISISDFNLRPFPKSGTNQFSLYY* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0586 498 Gene3D - 166 342 IPR027417 -
Apr5g0586 498 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 39 481 IPR044229 GO:0003924
Apr5g0586 498 Pfam 50S ribosome-binding GTPase 272 339 IPR006073 GO:0005525
Apr5g0586 498 CDD YqeH 135 338 - -
Apr5g0586 498 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 165 341 IPR030378 GO:0005525
Apr5g0586 498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 342 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0586 Apr-Chr5 7977895 7983859 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0586 K13427 - gmx:100781340 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0586 5 7977895 7983859 Apr5g0586 5 7977895 7983859 ECH