Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0580 ATGATGCTGGATTTGGGTCCGTTCTCGAATGAGAACTTCGACCCGAAGAAGTGGATCAACTCGGCGAGTCAGACTCGGCACCCTCAGGATTCGTTGGATAAGCACCTCGTCGACATGGAGATGAAGCTTCAGATGGTGTCCGAGGAAATCGCAGCATCGTTTGAAGAGCAGAGCGCCGCCGCTCTCCTCCGCGTCCCACGCGCCACTCGCGACGTCATTCGCCTCCGCGATGACGCCGTTTCTCTTCGTTCCGCTGTCTCCGCCATCCTCCAGAAGCTCAAGAAGGCAGAGGGATCATCGGCGGAATCTATAGCTGCCCTTGCTAAAGTAGACGTTGTCAAGCAGAGGATGGAAGCTGCTTATGAAACGTTGCAGGATGCTGCTGGATTAACTCAATTGAGTGCGACTGTGGAGGACGTATTTGCCAGTGGTGATCTCCCTCGCGCTGCAGAAACTCTGGCTAATATGAGGCATTGCTTGTCTGCAGTTGGGGAGGTTGCTGAATTTGCCAACATAAGAAAGCAACTGGAAGTCTTGGAAGATAGGCTAGATACCATGGTGCAGCCTCGGCTTACAGATGCATTATCCAATCGCAAGGTTGATGCTGCACAAGATTTACGGGGAATTCTCATTAGAATTGGAAGGTTCAAGTCTCTGGAATCACAATATATAAGGGTTCATCTGAAACCAATAAAGCAGCTTTGGGAAGATTTTGAATCAAGAGAACGAGCTAGTAAGTCTGCAAATGAGAAGGATGAGATGGAGAGGACATCAAGTGGTGCTGATTTTCAGTCCGTTTCACCTGCAATATCATTCTTCAGCTGGTTACCAAGCTTTTATGATGAACTACTACTTTATCTTGAACAAGAATGGAAATGGTGTACAATTGCTTTCCCTGAAGATTATAAAACTCTTGTCCCAAGGCTTCTAAGTGAGACTATGTTGGCTATAGGTGCCAGTTTCATATCTCGTATCAACCTTGCCATTGGAGATGCTGTTCCAGAAACGAAAGCACTAGCTAAAGGTTTATTAGATATTTTATCTGGAGATATGCAAAAGGGTATTAAGATTCAGACAAAGCATTTGGAGGCCTTGATTGAATTACACAACATGACTGGCACTTTTGCAAGGAATATTCAGCACTTATTTTCTGGTTCTGATGTTCGCGTTTTAATGGATGTGCTGAAAGCTGTGTACTTGCCTTATGAATCATTTAAACAGAGCATATCCAATAGGTATGGACAAATGGAGCGTGCCATCCTTTCATCTGAGATTGCTGGAGTAGATTTAAGAGGAGCTGTTATTCGAGGGGTGGGAGCCCAAGGTGTTGAACTTAGCGAAACAGTTCGCAGGATGGAGGAGTCTATTCCGCAAATTATTATTCTTTTTGAAGCAGCTGCTGAGAGATGCATCAGCTTCACTGGAGGTTCCGAGGCAGATGAATTAATTCTTGCCCTTGATGACATTATGTTACAATACATTTCCACTCTGCAAGAAACTCTCAAGTCACTAAGAACTGTCTGTGGTGTGGATTATGGTGGTGACGGTACTGTAAAGAAGGAGATGGAGAAAAAAGACGGAAACCAAAGTTCTCGGAGAGTTGATTTGCTCTCAAATGAGGAGGAATGGTCCATAGTCCAAGGGGCATTGCAGATCCTGACAGTTGCAGATAGTTTGACAAGCAGGTCTTCTGTCTTCGAAGCATCTTTAAGAGCTACTCTTGCTAGATTGAGCACAACCCTATCTTTTTCTGCATTCGGTTCAAGTTTAGACCAAAACCAGACTATAAATAGTGGTGTAGATGGGGAGCTGTCTTTTGGTGGAAGGGCTGCTTTGGATATGGCAACATTGCGGTTGGTTGATGTGCCTGAGAAGGCAAGGAAACTATTCAACCTTTTGAATCAGTCCAAAGATCCCCGGTTTCATGCACTTCCCCTTGCATCTCAAAGAGTTGCAGCATTTGCAGACACAGTTAATGAACTTGTATATGATGTCCTCATATCTAAAGTACGGCAGCGCCTCAGTGATGTGTCCCGTTTGCCAATATGGTCATCAGTTGAGGAACAAGGAGCTTTTCCTCTCCCTACGTTCAGTGCATATCCACAGTCCTATGTCACCAGTGTTGGGGAATATCTTCTTACTTTACCCCAACAATTGGAGCCACTTGCTGAGGGAATCTCCAACAGTGAAACCAATGATGAAGCACAGTTCTTTGCAACTGAATGGATGTTCAAGGTTGCGGAGGGTGCCACAGCACTTTACATCGAACAGTTGCGTGGGATTCAATACATTTCAGATCGTGGAGCGCAGCAGCTATCAGTTGATATCGAGTATCTTAGTAATGTGCTTTCCGCTCTGTCAATGCCAATCCCCCCAGTTTTGGCTACTTTCCAAAGTTGTCTTTCTACTCCAAGAAACCAGCTTAAAGATCTTTTGAAGATAGATTCAGCAAACCAACTTGATCTGCCAACAGCAAACCTTGTCTGTAAGATGCGGCGAGTAAATTTAGATTCATGA 2517 0.4489 MMLDLGPFSNENFDPKKWINSASQTRHPQDSLDKHLVDMEMKLQMVSEEIAASFEEQSAAALLRVPRATRDVIRLRDDAVSLRSAVSAILQKLKKAEGSSAESIAALAKVDVVKQRMEAAYETLQDAAGLTQLSATVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLEDRLDTMVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQYIRVHLKPIKQLWEDFESRERASKSANEKDEMERTSSGADFQSVSPAISFFSWLPSFYDELLLYLEQEWKWCTIAFPEDYKTLVPRLLSETMLAIGASFISRINLAIGDAVPETKALAKGLLDILSGDMQKGIKIQTKHLEALIELHNMTGTFARNIQHLFSGSDVRVLMDVLKAVYLPYESFKQSISNRYGQMERAILSSEIAGVDLRGAVIRGVGAQGVELSETVRRMEESIPQIIILFEAAAERCISFTGGSEADELILALDDIMLQYISTLQETLKSLRTVCGVDYGGDGTVKKEMEKKDGNQSSRRVDLLSNEEEWSIVQGALQILTVADSLTSRSSVFEASLRATLARLSTTLSFSAFGSSLDQNQTINSGVDGELSFGGRAALDMATLRLVDVPEKARKLFNLLNQSKDPRFHALPLASQRVAAFADTVNELVYDVLISKVRQRLSDVSRLPIWSSVEEQGAFPLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISNSETNDEAQFFATEWMFKVAEGATALYIEQLRGIQYISDRGAQQLSVDIEYLSNVLSALSMPIPPVLATFQSCLSTPRNQLKDLLKIDSANQLDLPTANLVCKMRRVNLDS* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0580 838 Pfam Golgi complex component 7 (COG7) 4 833 IPR019335 GO:0006886|GO:0017119
Apr5g0580 838 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 1 832 IPR019335 GO:0006886|GO:0017119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0580 K20294 - gmx:100796129 1505.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0580 5 7926824 7933449 Apr5g0580 5 7926824 7933449 ECH