Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0579 ATGGCGTCCTCTCTCACTGTGAAGCGTTTCCTTTCCTCTTCCCTCCTCTCTAGATCTCTCCTTCGCTCCACTGCTTCTGCATCCCGCTCCTTCAACACCAACGCCATGCGCCAGTACAATGAACATGCCGATGACCGCAGCGTCGACGTTGACCGTCGCTCTGATAACTCTTTCCCTCGCACTGCACGCCGTGAGGATATCATCTCAGATGTGTTCGATCCGTTCTTTCCAACTCGGAGTCTGAGTCAGGTTCTGAACGTGATGGATCAGTTAATGGATAATCCGTTCCTCTCTGCATCGCGCGGGATCGGAGCTGGAGTTGGAGCTCGTCGTGGATGGGATGCGAGAGAGACAGAAGATGGTCTGCTTCTACGCGTGGACATGCCTGGGCTCGGCAAGGAAGATGTGAAGATATCTGTGGAGCAGAACACACTCACCATCAAAGGTGAAGGTACCAAAGAAGGTGATGAAGAGGAAGGCGCTCGTCGCTACTCTAGCAGAATTGACTTGCCGGAGAAGCTTTACAAGATTGACCAAATCAAAGCTGAGATGAAGAACGGTGTGCTCAAAGTCGTTGTGCCGAAAATGAAGGAGGAGGAGAGAAACGATGTGATCAGTATCAAGGTTGATTAG 633 0.5134 MASSLTVKRFLSSSLLSRSLLRSTASASRSFNTNAMRQYNEHADDRSVDVDRRSDNSFPRTARREDIISDVFDPFFPTRSLSQVLNVMDQLMDNPFLSASRGIGAGVGARRGWDARETEDGLLLRVDMPGLGKEDVKISVEQNTLTIKGEGTKEGDEEEGARRYSSRIDLPEKLYKIDQIKAEMKNGVLKVVVPKMKEEERNDVISIKVD* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0579 210 MobiDBLite consensus disorder prediction 39 57 - -
Apr5g0579 210 CDD ACD_sHsps-like 114 195 - -
Apr5g0579 210 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 104 210 IPR002068 -
Apr5g0579 210 Pfam Hsp20/alpha crystallin family 115 209 IPR002068 -
Apr5g0579 210 Gene3D - 63 209 IPR008978 -
Apr5g0579 210 PANTHER 23.6 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 209 - -
Apr5g0579 210 SUPERFAMILY HSP20-like chaperones 85 201 IPR008978 -
Apr5g0579 210 MobiDBLite consensus disorder prediction 38 57 - -
Apr5g0579 210 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 209 IPR044656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0579 Apr-Chr5 7906117 7907245 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0579 K13993 - gmx:547852 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0579 5 7906117 7907245 Apr5g0579 5 7906117 7907245 ECH